Gene Sros_8179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8179 
Symbol 
ID8671507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9021739 
End bp9022410 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID 
Productproline/glycine betaine ABC transporter 
Protein accessionYP_003343573 
Protein GI271969377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTGGC TGATCGACTT CTTCGGCAAC CCGGACAACT GGTCCGGCCC GGACGGCATC 
CCCGTCCGGC TGCTGGAGCA CCTGGAGTTC TCCGGGCTCT CGCTGCTGCT GGCCATGCTG
ATCGCGCTGC CGCTGGGGCT GTGGATCGGC CACACGGGCA GGGGCGCGCT GTTCGCGATC
CTGAGCGCCA ACGCGGCCCG CGCCCTGCCG ACGCTGGGCC TGCTCGTGCT CATCGTGCTG
CTGATGGGCG TCGGCACCAT CGTCCCGGTG CTGATCCCGC TGGTGGCGCT CGCCGTACCG
CCCATCCTGG TCAACACCTA CGAGGGCCTG CGCGGGGTGG ATCCCGACCT GCGCGACGCC
GCGTACGGCA TGGGCCTGCG CGGGGGCGAG GTGCTCGGCC GGGTGCTCGT GCCGGTGGCG
CTGCCGCTGA TCCTGCTCGG CCTGCGGATC GCCGCGATCC AGGTGGTGTC GACCGCGACC
GTGGCCGCCT ACGTGGGCCT GGGCGGCCTG GGCCGGTTCA TCGTCGACGG CCTGGCGACC
AAGGACTTCC CGCGCACGAT CGGAGGGGCA GTCCTGGTGG CGCTGCTGGC CCTGATCGTC
CAGCTGGGTT TCGCTCTGGT GCAACGCGTC ATGGTCTCCC CGGGGGTGAG TCAGCGCCAG
ACCGTACGCT AA
 
Protein sequence
MNWLIDFFGN PDNWSGPDGI PVRLLEHLEF SGLSLLLAML IALPLGLWIG HTGRGALFAI 
LSANAARALP TLGLLVLIVL LMGVGTIVPV LIPLVALAVP PILVNTYEGL RGVDPDLRDA
AYGMGLRGGE VLGRVLVPVA LPLILLGLRI AAIQVVSTAT VAAYVGLGGL GRFIVDGLAT
KDFPRTIGGA VLVALLALIV QLGFALVQRV MVSPGVSQRQ TVR