Gene Sros_8178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8178 
Symbol 
ID8671506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9020787 
End bp9021701 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC transporter substrate binding protein (proline/glycine/betaine) 
Protein accessionYP_003343572 
Protein GI271969376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TGTTCAGCAC CGCGGCAGTC ATCCTGTCCG CGGCGCTCAC ACTTACCGCG 
TGCGGTGGCG GTGGCGACCC GCTCACCAGC GCGTCCGCGA GCCCCGCGGG CTCCGGATCC
GCGGCCGGGG GGAAGGTCGT CGTCGGCTCG GCCAACTTCC CGGAGAACGT CCTGCTCGCA
GAGATCTACG CCCAGGCCCT GGAGGCCAAG GGGGTGCAGG TCGAGAAGAA GCTCAACATC
GGCAGCCGCG AGGTCCTGTT CGACCAGGCC AAGAGCGGTG GTCTGACGGT CCTGCCGGAG
TACATCGGCT CCCTGCTGGC CTTCGTCGAC AAGACGACGA CGGCCAAGAC CAAGGACGAC
GTCGTCGCCG GGCTCAAGGA GAAGCTCCCG GCCGAGCTGG AGGTCCTGGA GCCCGCCGCG
GCCGAGGACA ACAACTCACT GACCGTCACC AAGGCGACCG CCACCAAGGA CGGCCTCACC
ACGATCGAGG ACCTGGTCAA GGTCGGCAAG AACTACGCCG TGGGCGGCCC GCCGGAGTTC
CAGTCCCGCC AGGAGAAGAA CTTCAAGGAC ACCTACGGCC TGGAGTTCAA GGAGTGGAAG
AAGACCGGTG ACGCCACCGC CGACGCCATC AAGGACGGCA CCGTCCAGGT GGGCAACGTC
TTCACCACCG ACCCCAAGAT CGTGATCAAC GACCTGGTCT CGTTGAAGGA CACCAAGAAC
GCCTTCGCCG CCGACAACGT CGCGCCCCTG GTCAACAAGG CCGCGGTGAA CGACACCGTG
AAGAGCACGC TGAACGCCGT CTCCGCCAAG CTCGACACCC CCGGTCTGCT CGCGCTGATG
AAGCGCGTGG CGATCGACAA GGACGACGCG GCCACGGTCG CCAAGGACTG GCTGACCCAG
AACAGCCTGC TCTAG
 
Protein sequence
MKRLFSTAAV ILSAALTLTA CGGGGDPLTS ASASPAGSGS AAGGKVVVGS ANFPENVLLA 
EIYAQALEAK GVQVEKKLNI GSREVLFDQA KSGGLTVLPE YIGSLLAFVD KTTTAKTKDD
VVAGLKEKLP AELEVLEPAA AEDNNSLTVT KATATKDGLT TIEDLVKVGK NYAVGGPPEF
QSRQEKNFKD TYGLEFKEWK KTGDATADAI KDGTVQVGNV FTTDPKIVIN DLVSLKDTKN
AFAADNVAPL VNKAAVNDTV KSTLNAVSAK LDTPGLLALM KRVAIDKDDA ATVAKDWLTQ
NSLL