Gene Sros_8148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8148 
Symbol 
ID8671476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8989634 
End bp8990299 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003343546 
Protein GI271969350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.882729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA AGCAACGCGG CGGGGGAGGG GTGAACGAGC AGCGGCGTGC GCGGCTGCGG 
CTGGAGATCT CCCGGGAGGC GGCGCGTCTC TTCTGGGAGC AGGGAGTGGC CGCGACCAGC
GGCGATCAGA TCGCGGACGC CGTGGATCTG TCCACTCGCA CCCTCTGGCG GCACTTCCGC
AGCAAGGAAA GCTGCGCGGA GCCGATCATC ATGCAGGGCG TGGTCACGTT GCTGGGCGTG
CTGCGCCGCT GGCCCCGGCA GAGCTCCCTG GAGGATCACC TGGCAACGGA ACTGACCAAC
CTCAGACTCG GTCACGAAAC GCCGCCTGTC GGGCTTGCCG ACGAGATGCT CGCGATGAGG
ATGATCCGGC TCGCCGACAC CGACCCAGCG TTGCGCACTG CGTGGCTTAT GGCCTGCGAC
CAGGTGGAAC GCGAGATGTG CGCGATCATC GGTGATCGTC TCGAGCGCCC GGCCGGTGAT
CTGGAGGTGC GTATGCACGC CGCGTCGGCA GCGGCTGTGG TACGGGTGCT GGACGAGCAC
ATCGGCGCCG CCGCGCTCGC CGGCGACGAC CTCACCGAGT TCGAAGACGT GACGGCCCTC
GCCCGGCGCT ACGCCCACGC GATCCGCACC GCCACCGGCG GAGCCGTCGG CGACCCCGTC
GCCTGA
 
Protein sequence
MTTKQRGGGG VNEQRRARLR LEISREAARL FWEQGVAATS GDQIADAVDL STRTLWRHFR 
SKESCAEPII MQGVVTLLGV LRRWPRQSSL EDHLATELTN LRLGHETPPV GLADEMLAMR
MIRLADTDPA LRTAWLMACD QVEREMCAII GDRLERPAGD LEVRMHAASA AAVVRVLDEH
IGAAALAGDD LTEFEDVTAL ARRYAHAIRT ATGGAVGDPV A