Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8049 |
Symbol | |
ID | 8671377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8860467 |
End bp | 8863142 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003343447 |
Protein GI | 271969251 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTCG ATCCGGTCGT ACGGCTCGCG GGCGCCGGCC GCGTGCACGG TGACGGGCCG CGCGCCGCAC GCTCCCCGCT GGCCGCGCTT CTGGCCGCCC TGCGGATCTC CCGGCGGGAC GCGCTGCGGT CCAGGGGCCG CAGCGCCCTG ATCGTCGCGA TGGTCGGCCT GCCCGTTCTC GTCATCACCG TGACCCTGAC CTTCGCCGAG ACGGCGGACA TCACCCCGCG CGAGGGCCTC ACCGCGCAGA TCGGCGCCGC CGACCTGCGG ATCTGGACGC TCGGTGGGCA GCGATTCCCG GCGCGAGACG CCGGCGGTGA GATCTCCTGG ACGGAGGTTC CCAGCTCGCC GGCGGAGATC GTGAGTCTGC TCGACCACGG AGCCCGGGTC ATCCCGGCGA ACGACGGCAG CGTCGACTTC AGGGGTGAGG ATGGCTACGA CCACGTGGCC GCCCATGAGC TGGACCTGCG CGACCCGCTG ACGGCCGGGA TGTACCGCCT GTTGCGCGGC CGCCTCCCGG CCGCTCCCGG GGAGATCGCG GTGACTCCGG GGACGGAGGA GCGGGGAGCG CCTCTCGGCA CGACACCGGC CGTCGGCCCG AAGAAGACGC CCAAGCGGGT GGTCGGCGTG GTCGAACATC CGCACCGGAC CAGGAGTGCG GAGATCGTGG GCTTGCCGGG CACCCTGCTT CTCGATGGGC GGGACGGTCA GGGCACCGGC TGGCTGGCCG ACACCTCGCA ACCGATCACC CGGGAGGACA TCCGCAGGCT GAACGCCGCC GGGCTGGGCG TCCGCGCTCC TGTCGTCCCC GAAGGCTCGG ACGGCTCAAA CGACTGCTGC TGGATCGTCA GCCCCTATGA CGTCGAACAG CTCATGGCCA TCGGCCTCGC CGTGGTCATG AGTGTGCTGG AGGTGGTGCT GCTCGCCGGT CCCGCCTTCG CGGTCGGGCT GCGCCGCCGC CGCCGCGAGC TGGCGCTGAT CGCCGCGCAG GGCGGGGCAC CGGGGCACCT CCGCATGATC GTTTTAGCCG ATGGTGTGGT TCTGGGCGGT GGCGCGGCGC TGCTCGGCCT GATCCTGGGC GTCGGCCTGG GGGCACTGGC GGCACTGCTG GAAGCGGGTC GGCTGATCGG CGGGCTCGGT CCACTGGACA TCCCGTGGCA CCCGATCCTG ACCGTCACCC TGCTGGGGGC GGTCAGCGGG ATCACGGCCG CCGTGGTGCC CGCCGTACAG GCGGCCCGTC AGGACGTCGC GGCGGTGCTC GGCGGGCGTA GGAGCCAGGC GCGCGACCGC GCGGGCCGTC CGGTCCTCGG CCTGGTCCTG CTCGTGGTCG GCGCCGCTGC GGCCGTGTTC GCTGTCAGGT TCCACCCGGT CTGGGTCCTC GCCGCGGCCG TCCTGGCCCA ACTGGGGTTG GTCGCGCTGG CTCCGGCGCT GGTCAGGATC GCGGCGAGCC TGGCCACGCG GCTTCCCCTG CCGGTCCGGC TGGCCGCCCG CGACGCCTCC CGCCACCGGG GCCGTACGGC CTCCGCTGTC GCGGCGGTCA TGACGGCGGC GGCGGCCTTC ACCGCGATGG CTGTCATGAC CAACAGCAAC TTCGCCGTCA GCCGGGACTC TTTCCAGGCG GCGCTCCCCG AGGGGATCAT GAGGATCAGC GGGCCCGACC GCGACGACGC CCGGTGGACC GGGATCAAGG CGGTCGCCGA GCGGATGTTC CCCGAGACAC CGCTGATCGA GGCCGCCGAG CCCTTGGACA TCACGGGAAC CTCCATCGAG CTCGCCCCCC TGCACTTCTC GGACGGCGGG CCGTACGCGG GACGTTCCTA CTCCGGAGGG CTGCCAGTCG GAGGTCGGCA GCTGCTGGAG CTCGTCCAGG GGCGGCGGGA TCCGGTCGCC GCGGCGGCGC TCGACGCGGG CAAGGCCGTG GCGTTCGACC CGCGCCTGGT GCGTGACGGG CGGATGAGGC TGCATGTCAT GGCGTTCACC TCCGAGGAGT ACGAGGTCCC GGACGACCTC ACGGTCCCCG CGGTCGTGGC CGAGGCCGCC GACCCCCAGT ACGCAGTCGG GGTGCTCCCT GCCTCCGCAC TCCATGCCAT CGGGCTGAAG ACGAAGGCCG ACACGCTGTA CATCGACCCC GCCGGCCACC TACTCGACCG GGAGCGGGAG GGCAAGCTGG AGCGGGAGTT GGCGGCGGCG GCAGGCGGCA GCGTCGACGT GTTCGTTCAG GGCGGGCTCG GGCAGGGCGT TCTTCCGCAG CTGGCGCTGT TCCTCGCTGC GGCGTCGGTC CTGGTGCTGG GTGGCACGTT CGCCGCCACC GGGCTCGCGG CGGCCGACCT GCGGCCCGAC CTCGCGACCA TGGCCGCCGT CGGGGCGCCG CCCGGCACGC GGCGGCTGGT CGTCGCCGGG CAGGCGGGGT TCATCGCCGG GCTTGGCGCG CTGGTCGGTG CCCTCGCGGG GATCGCGACC GGGATCGCGG CGATCTGGCC GGTGCTGGGA CAGGCAAGGA ATGTCGGCGG GCCGACGACG CCCGGGGGGC TGCCGCCGTT CCCCGGCAGG GCGCCGACCA TCGAGATCCC CTGGCTCTTC CTCGTGGCAC TGGTGGTCGG GCTGCCAGTG CTGGCGGCGT TGCTGGCGGG GGCGTTCACC CGGACGAGAA CGACGCTGAC CCGCCGGACC GGATAG
|
Protein sequence | MSFDPVVRLA GAGRVHGDGP RAARSPLAAL LAALRISRRD ALRSRGRSAL IVAMVGLPVL VITVTLTFAE TADITPREGL TAQIGAADLR IWTLGGQRFP ARDAGGEISW TEVPSSPAEI VSLLDHGARV IPANDGSVDF RGEDGYDHVA AHELDLRDPL TAGMYRLLRG RLPAAPGEIA VTPGTEERGA PLGTTPAVGP KKTPKRVVGV VEHPHRTRSA EIVGLPGTLL LDGRDGQGTG WLADTSQPIT REDIRRLNAA GLGVRAPVVP EGSDGSNDCC WIVSPYDVEQ LMAIGLAVVM SVLEVVLLAG PAFAVGLRRR RRELALIAAQ GGAPGHLRMI VLADGVVLGG GAALLGLILG VGLGALAALL EAGRLIGGLG PLDIPWHPIL TVTLLGAVSG ITAAVVPAVQ AARQDVAAVL GGRRSQARDR AGRPVLGLVL LVVGAAAAVF AVRFHPVWVL AAAVLAQLGL VALAPALVRI AASLATRLPL PVRLAARDAS RHRGRTASAV AAVMTAAAAF TAMAVMTNSN FAVSRDSFQA ALPEGIMRIS GPDRDDARWT GIKAVAERMF PETPLIEAAE PLDITGTSIE LAPLHFSDGG PYAGRSYSGG LPVGGRQLLE LVQGRRDPVA AAALDAGKAV AFDPRLVRDG RMRLHVMAFT SEEYEVPDDL TVPAVVAEAA DPQYAVGVLP ASALHAIGLK TKADTLYIDP AGHLLDRERE GKLERELAAA AGGSVDVFVQ GGLGQGVLPQ LALFLAAASV LVLGGTFAAT GLAAADLRPD LATMAAVGAP PGTRRLVVAG QAGFIAGLGA LVGALAGIAT GIAAIWPVLG QARNVGGPTT PGGLPPFPGR APTIEIPWLF LVALVVGLPV LAALLAGAFT RTRTTLTRRT G
|
| |