Gene Sros_7977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7977 
Symbol 
ID8671302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8791225 
End bp8792718 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343375 
Protein GI271969179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.37687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.148037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC TGAGAAGTAG GCGGCAACGG CACGTCGTGC TCGTCCTCCT GATCGGGTTG 
GCGGCATGCG CCCTGTCCGC CTGCGGGGGC GGGCCGGCAC CGGGCTCGCT CCCGCCCGGC
CGGGTCTCCG CGACCGGCGG CGGGGTGCCG CCCGGCGGCG TGGCGAGCGC CCCGGCCGAC
GGATCGGCCG CACCGGGCGA CGCCTCCGCC CGCCCTGCTC TCCCCGGCGC CGCTCCCCGG
ACCACACCGA CGGACGTCTA CGCCCACGAC CGGCCCGGCA TGCTCAGCCC CGCCGTGGCG
GAGTTCCCCG AGCGGGTCTA CGTGCCCAAC AGCGGGAGCG ACACCGTCAC CGTGATCGAC
CCACGCACCT ACCGGGTGCT CCGTACTCTC AAGGTCGGCC GGCGGCCGCA GCACGTCGTC
CCGTCGTGGG ATCTGAAGAC GCTCTGGGTC AACAACGACG GCGGCGACTC CCTGACTCCG
ATCGACCCCA TGACCGGCCG GCCCGGCAGG CCGGTGTCCG TCGACGACCC CTACAACCTG
TATTTCACCC CGGACGGCCG CAACGCCCTG GTGATGGCCG AGCGGGAGAA CCGGCTCGAT
TTCCTCAGTC CGCGCACCAT GCGGCTCCGG CGATCGCTGC ACATGCCCTG CAAGGGGGTC
AACCACGCGG ACTTCACCGC CGACGGGAAG ATCATGCTGG CCAGCTGCGA GCTCTCCGGG
CGGCTGGTGG CCGTCGACAT GCGGGCCCGG AAGGTCCGCG CGGTCGTCGA CCTGGCGGAC
GGCACCACAC GGCGCAGGGA CATCCGGCAC GGCGGCACCC GGCATCGCGG CACGCGGGCC
AGCGGCGTGC CGCACCGCGT GAAGCACGGC TCCACGCGAC ACGGCTCCGT CCAGCACGGC
TCCACGCGAC ACGGCTTCAT CCAGCACGGC TCCACGGGGC ATGACCTCAC GCGGAACACC
ACCGCGCCGC CCGGATCCAC GTGGAACACC ACCGTGCCGC CCGGATCCAC GCGTCACGGC
GCCACGCGGA ACACCACCAT GCCGCAGGAC GTCAAGCTCT CCCCCGACGG CACCACCTTC
TACGTCGCCG ACATGGCCAA GCACGGCGTG TGGCTGGTCG ACGCCGGGAA GCTCCGCGTC
ACGGGTTTCA TCAGGACCGG CCGGGGCGCT CACGGGCTCC ACGTCAGCCG GGACTCGAAG
GTGCTGTACG TGTCCAACAG CGGCGCCGGA TCGGTCACCG TCGTCTCCTT CGCGCTCCGC
CGCCCGGTCG ACACCTGGCG CGTCCCCGGC GGCGGCTCAC CGGACATGGG CGGGGTCTCC
GCCGACGGCA GCCGCCTGTG GCTGTCGGGA CGCCACGACG GGGTCGTCTA CGTGTTCGAC
ACCGGCGACG GCCGTCTCAT CCGCAAGATC GACGTCGGCG CCGGCCCGCA CGGCCTGGCC
GTCTACCCCC AGCCCGGACG CTACTCGCTC GGCCACACGG GGGTCTTCCG GTGA
 
Protein sequence
MQRLRSRRQR HVVLVLLIGL AACALSACGG GPAPGSLPPG RVSATGGGVP PGGVASAPAD 
GSAAPGDASA RPALPGAAPR TTPTDVYAHD RPGMLSPAVA EFPERVYVPN SGSDTVTVID
PRTYRVLRTL KVGRRPQHVV PSWDLKTLWV NNDGGDSLTP IDPMTGRPGR PVSVDDPYNL
YFTPDGRNAL VMAERENRLD FLSPRTMRLR RSLHMPCKGV NHADFTADGK IMLASCELSG
RLVAVDMRAR KVRAVVDLAD GTTRRRDIRH GGTRHRGTRA SGVPHRVKHG STRHGSVQHG
STRHGFIQHG STGHDLTRNT TAPPGSTWNT TVPPGSTRHG ATRNTTMPQD VKLSPDGTTF
YVADMAKHGV WLVDAGKLRV TGFIRTGRGA HGLHVSRDSK VLYVSNSGAG SVTVVSFALR
RPVDTWRVPG GGSPDMGGVS ADGSRLWLSG RHDGVVYVFD TGDGRLIRKI DVGAGPHGLA
VYPQPGRYSL GHTGVFR