Gene Sros_7160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7160 
Symbol 
ID8670471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7907355 
End bp7907822 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscription activator effector binding protein 
Protein accessionYP_003342598 
Protein GI271968402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.46886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0205342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTTG TTGATCGGCC CGAGATGATT GTCGTAGGCC ATGCCGTACG GACCTCGAAC 
GCCGACGAGG CCGAACCGGG CAGGGGGCGG CTGGGCGCGC TGTGGGCGCG GGCGGGGGCT
CCCGGAGCGT TCGCGCACGT CCCCGGCCGG GTGGACGAGA ACATCTACGC GGTGCTGACC
GACTACGAGA GCGATCACCA CGGCTCCTAC ACGCAGATCG TCGGGGTGGC CGTCCGCACC
GCCGCCGCGC TGCCCGAGGG CATGGTCGCG GTCCGGGTGC CCGGCGTCCA GTCGCTGAAG
CTGGAGGCCC GCGGGCCGAT GCCGGGGGCG CTCCTGGAGG CCTGGCAGCG GCTGTGGAAG
CACACCGAGT CCGGTGGCAC CCCGCCCCGC GCCTTCACCA CCGACCTGGA GGTCCACCAC
CCGGCGGGCG CCGACCTCTA CGTGGCGGTC TTCCCGTCGA TGGGCTGA
 
Protein sequence
MIVVDRPEMI VVGHAVRTSN ADEAEPGRGR LGALWARAGA PGAFAHVPGR VDENIYAVLT 
DYESDHHGSY TQIVGVAVRT AAALPEGMVA VRVPGVQSLK LEARGPMPGA LLEAWQRLWK
HTESGGTPPR AFTTDLEVHH PAGADLYVAV FPSMG