Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7160 |
Symbol | |
ID | 8670471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7907355 |
End bp | 7907822 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcription activator effector binding protein |
Protein accession | YP_003342598 |
Protein GI | 271968402 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.46886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0205342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTTG TTGATCGGCC CGAGATGATT GTCGTAGGCC ATGCCGTACG GACCTCGAAC GCCGACGAGG CCGAACCGGG CAGGGGGCGG CTGGGCGCGC TGTGGGCGCG GGCGGGGGCT CCCGGAGCGT TCGCGCACGT CCCCGGCCGG GTGGACGAGA ACATCTACGC GGTGCTGACC GACTACGAGA GCGATCACCA CGGCTCCTAC ACGCAGATCG TCGGGGTGGC CGTCCGCACC GCCGCCGCGC TGCCCGAGGG CATGGTCGCG GTCCGGGTGC CCGGCGTCCA GTCGCTGAAG CTGGAGGCCC GCGGGCCGAT GCCGGGGGCG CTCCTGGAGG CCTGGCAGCG GCTGTGGAAG CACACCGAGT CCGGTGGCAC CCCGCCCCGC GCCTTCACCA CCGACCTGGA GGTCCACCAC CCGGCGGGCG CCGACCTCTA CGTGGCGGTC TTCCCGTCGA TGGGCTGA
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Protein sequence | MIVVDRPEMI VVGHAVRTSN ADEAEPGRGR LGALWARAGA PGAFAHVPGR VDENIYAVLT DYESDHHGSY TQIVGVAVRT AAALPEGMVA VRVPGVQSLK LEARGPMPGA LLEAWQRLWK HTESGGTPPR AFTTDLEVHH PAGADLYVAV FPSMG
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