Gene Sros_7139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7139 
Symbol 
ID8670450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7878458 
End bp7880917 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342577 
Protein GI271968381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.313674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCCG ATAAGCAGCA GGGTCTCGGC ACGCATATTC CAAGACTATC GCAGTCCGCA 
AGCCATATTC GTGGGACGGG GAACAAGCCC GATCACGGCA AACCGGGGAC ACCGGCACCG
GAGGGTCAGC ACAATGGGAG GCTCGTGCGT CTGGGACGGG TCAGGGCCGA TGGTGATACG
TCCGTTGTGA CCTCACTTGT CCCGTCAGTT TACTCTTTCA CCGTGGCACA CTCAGTCGAG
CCGGGGCAGG GCCCGGATCC TTCGGAGGTC GGCCTGCCGA TGCAGGATCC GCCAACCGAC
CCCACCGGAC TCCAGTTCAG AGGGGCGTTC TCCAGTTTCC CTGCGAACCC CCCCGCCTCA
CGTGAGACCA TGCCCAATAC CCATAATTCG GGCACACGCC CGGGAGGTAA GGAAGCCATG
GCCTCGGAGC AGTCCAGCCA GTCCCACCTG CCTCCGGCAT GGCCGGAGGC AGCAGAGCCG
CCGCCCGCCT GGGCGAAGGA CTCTCACGGC ACCAGCCCCC GGCTCCCCCT TCCCCCGGAG
GAGCCCGCAG GAGACGGCAC CTCCTGGCAG GCCGGCGTCC CCGGCAACGG TTCCTGGCAA
CATGCCTTCG GAGCGGCGAC CCCCGGCTCC CCGTCTCAGG CGCCGCAGCC CTCCGGCCCG
CAGTCGGGCG GCGACTCCTG GCAGGCCGCC GCGCCGCCGC AGGAGCAGCC CGGCACCTGG
CCGCCCGCTT CGCCGGCCGA GAACGGCGGG TGGCCCGCGA CGCAGGCCAC CGACAACGGC
GGATGGGGTA CGGCGCCGGC CGCCGGAGGC GGCGGATGGG ACGTGGCCAA GAGCACCGAC
AACGGCGGAT GGGGTACGGC CGCGCAGAAC ACCGGCGACG GCGGATGGAG TACGGCGCCG
GCCTCGAACG ACGGCGGGCG GAACGCCGCC GCGCCGGCCG GCAACGGCGG ATGGGACCGC
CCACCGGCCG AGGCGCCGAG CCATGAGCAC TCCTCCCCCT CCTGGACGAA CCCACCGGGC
GGAAACCCGA ACCCGTTCGG CAGCCAGGAC CCCCTCACCA GCCCCAACCC CTTCGGCGGC
CAGGAACACC TGACCAACCC GCCCGGCGGA AACCCCAACC CCTTCGCCAC ACAGGACCCG
CTCACCAGTC CCAACCCCTT CGGCGGCCAG GACCCGCTCA CGAGCCCCAA CCCGTTCGGC
GGCCAAGAGC ACCTGACCAA CCCGCCCGGC GGAAACCCCA ACCCCTTCGG CAGCCAGGAC
CCGCTCACCA GCCCCAACCC CTTCGGCGGC CAGGACCCGT TCGGCAACCC CTCGGGCAAC
GGCGTCGCCC CGGAGAATCC CGGCGTGTGG GCCCTCGCGG GGGCGACCGC CCCGGAGGCG
CCTCCGGGCG CCCCGCCGCA GCTTCCGCCG TACCACGCTC CTCCGCAGGG AGGGCCCGCG
CCCGCCCATC CGGGCAACGG CCAGCACCCC GGACAGCCGC ACCCGGGCCA GCCTCACCCG
GGACAGCAGC CCATGGCGGG CCAGCCGGGC CCCGGCCAGC CTCACCCCGG ACAGCAGCCC
ATGACGGGCC AGCCGGGCGG GCACCTGAGC AGGGACCCGT CCGACCCCAA CAGGCCGTTC
GTCACCGCGG GCCAGATCAG CGGCCCGAAG ACCCCGCCGC CGGAGCGCCA GCAGGAGCTG
TGGAACACGG TCTTCGGCGA CAACTACCAG GCCATGGATG ACGAGCAGGA GCTCGACGGG
CCGGGCAGGC CGGTCTGGGT GTTCGCGCTG GCCGGTTCCG TGGTGATCGC CCTGATCGGG
GCCGTGCTCT GGGCCTTCCT GGCCGGCCCC CTGGCTTCCA CCAAGGAGGA GGCCACCCCG
GAGGTCAAGC CCTCCGCGAC CGGGAAGAAG CCCGCCAAGT CCCAGGCGGT GGGCCGCCTG
CCGCGCTTCC CAGGCAAGGC CTCACCGGTG GTCGGCACCC TGCCCGACCA GGCCGCAGCG
ATCAGCGTGG CCAAGCTCGG CACGCCCTGG CAGCAGGACC AGCGCCCGGC CATGCCCACC
ACCTACGGCT TCACCACCCG TCAGTACGTC CCGGCCGGTC CGGACTCCAC GGGCAAGACG
CAGTTCGCCC AGGTGATGTC GGGCCCGCTC TCGCCCCGGC TGAAGAGCAA GTACACCTCA
CCGGGGAACC TGGCCCCGGT GATCAACGCG GTCGCGTCCA GCGGCCGGAA GAAGTTCTTC
CCCGAGGACA ACTCCGCCCG CAAGACCGCG CAGCAGACCC TGAACGTCAA CGGCCTGCGG
GGACAGCTCT CCGCGTATGA GATCACGTCG GGCACGTCCA AGACGACCAT GGTCGTGGCC
GCCCTGAGCA CCGGCGCCGA CCTGCCCGCG ATCGTCTACA TGTCGGTGCC GGACAGCAAG
AAGGAGCTGC TGCCCGACAT CAACACCGTG TTCAAGTCGA TCCGGTCGAC GACCCCGTGA
 
Protein sequence
MRPDKQQGLG THIPRLSQSA SHIRGTGNKP DHGKPGTPAP EGQHNGRLVR LGRVRADGDT 
SVVTSLVPSV YSFTVAHSVE PGQGPDPSEV GLPMQDPPTD PTGLQFRGAF SSFPANPPAS
RETMPNTHNS GTRPGGKEAM ASEQSSQSHL PPAWPEAAEP PPAWAKDSHG TSPRLPLPPE
EPAGDGTSWQ AGVPGNGSWQ HAFGAATPGS PSQAPQPSGP QSGGDSWQAA APPQEQPGTW
PPASPAENGG WPATQATDNG GWGTAPAAGG GGWDVAKSTD NGGWGTAAQN TGDGGWSTAP
ASNDGGRNAA APAGNGGWDR PPAEAPSHEH SSPSWTNPPG GNPNPFGSQD PLTSPNPFGG
QEHLTNPPGG NPNPFATQDP LTSPNPFGGQ DPLTSPNPFG GQEHLTNPPG GNPNPFGSQD
PLTSPNPFGG QDPFGNPSGN GVAPENPGVW ALAGATAPEA PPGAPPQLPP YHAPPQGGPA
PAHPGNGQHP GQPHPGQPHP GQQPMAGQPG PGQPHPGQQP MTGQPGGHLS RDPSDPNRPF
VTAGQISGPK TPPPERQQEL WNTVFGDNYQ AMDDEQELDG PGRPVWVFAL AGSVVIALIG
AVLWAFLAGP LASTKEEATP EVKPSATGKK PAKSQAVGRL PRFPGKASPV VGTLPDQAAA
ISVAKLGTPW QQDQRPAMPT TYGFTTRQYV PAGPDSTGKT QFAQVMSGPL SPRLKSKYTS
PGNLAPVINA VASSGRKKFF PEDNSARKTA QQTLNVNGLR GQLSAYEITS GTSKTTMVVA
ALSTGADLPA IVYMSVPDSK KELLPDINTV FKSIRSTTP