Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7089 |
Symbol | |
ID | 8670400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7816534 |
End bp | 7818627 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
Protein accession | YP_003342529 |
Protein GI | 271968333 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0288523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG AAACCTCCGT GCCCCGTCCC CGGGAGTCGG GTGTGGACAT CTCAGACCCC GGCCTGCTGC AGGGCCTGTT GTCGCAGTCG CCGTTCGCCT TCGCGTTCTT CGACCCCGAC GGCCGCTTCC AGCGGGTCGA CGAGGTCTTC GCCGACGTGG TCGGTCTCCC GGTCGAGCGC CTGGTCGGCC GGGCCCCGGG CGAGTTGCTC TCCGCCGACC TCACCGCGCT GGTGGAGGGG TCGGTCCGCG GCGTCGTCGA AGGGACCGGG GTCGAGGCGG ACCAGCGGAT CCGGGTGCGC ACCGCCGACG GGCAGACCCG TCACTGGTCG CTGACGTTCT CCCCGATCCA CGACGACAAG AGCGAGCTCC GCGCGGTCTG CCTGGTCGGC GTGGACATCA CCGAGAGCAG GCAGGTCGAG GAGGACCTGC GGCGCAGCGA GGAGCGCTAC CGCTCGCTGG TCGAGGCGCA GTCCCAGCTC GTGTGGATCA CCGCCCCGAC CGGGGCCGTG GTGGAGGACG CGCCGCAGTG GCGCGCCATC ACCGGCCAGG GCCTGGAGGA ATACCTCGCC CACGGCTGGC TGGAGGCCGT CCATCCCGAC GACCGGCCGC ACGCGGAGGA GGCCTGGCGC GAGGCGCTGC GCGGCCGGAT CATGTTCGAG TGGAACTACC GGGTCCGCAC CCGGGCCAGC GGTTACCGCC ACTTCGAGGT GCGCGCGGTC CCGATCATCC GCCACGGCCG GGTGGTCGAG TGGGTGGGCG CCAACACCGA CGTCACCCCC CAGCGCGAGG CCGAGGAGAT GCGCGGCCGG CTCACCGACC AGCTCGGCGC GGCCGCCCTG CGTACGGCAC GGCTGCAGGG CGCCACGGCG CAGCTCGCCG AGGCGCTCAC CGTCGAGCAG GTCGTCCAGG TCATCATCGA CGTCGGCCGT ACGGCACTGG CGGCCGACCG CTCGGCGGTG GCCCTGCTCG ACGTCGAGCG GGCCGCGCTG AAGCTGGTCA ACAGCGGTGG CATCCCCGAT GTTCCCGGTG CGCCCGGCGA GGAGATCCCG CTGTCGCACT CCAGCGTGAT GACCATGGCG GTCAACAGCC GCCGTCCGGT CTTCGCCGAA TCGCCCGACA GCCTGCGCTC CCAGCTCGTG GACGCCGGGG GCGACGACGA GGCCGTCACC GGCTTCATCG ACCACAGCGA CGAGCGGGCC TGGGTGGGCC TGCCGCTGCT GGCCGCGGGA CGCGCGCTCG GCGCGCTGAG GTTCTCCTTC ACCCGTCCGC AGAAGATCTC CCAGGAAGAC GGCGTGTTCC TGGAGGCGCT CGCCGGGCAG TGCGCCCTGG CCGTGGAGCG GGCCACCCTG TTCGAGCGTG AGCACCGCAC CGCCGAGACG CTCCAGCGCA GCCTCCTGCC CGATCGCCTG CCGGTGGTGC GCGGCCTGGT GCTGGCCCAG CGCTTCCGCT CGGGCAGCCG TCACGTGCAG GTCGGCGGAG ACTGGTACGA CGCGTTCGTC CTGCAGGACG GCCGGGTCGC CGCGGTGGTC GGCGACGTCA TGGGCAAGGG CGTCAAGGCC GCGGCCGGCA TGGGCCGCAT CCGCAACGCG ATGCGGGCCC TGGCGCTGAC CAATCCGCCG CCCGCGGCGG TCCTCACCGG CCTGGACCGG GTCTTCGAGG CCACAGAGGA GGAAGAGCAG GTCACCACCC TCGCCTACAT GGTCGTCGAA CCCGGCACGG GAGAGGGCAC GCTGGCGCTG GCCGGCCACC CGCCGCCCCT GCTGGTCTCA CCGCAGGGCA TGCCGCTGCT GTGCGACGGC GAGCCGGGCA CCCCGCTCGG CTGGCCGACG AGCCGCAGGC AGTTCCGGTT CTGTGTCCCG CCGGGGCACA CCGCTGTCCT TTATTCGGAT GGTCTGGTGG AGAACCGGAA GCGTGGGCTG GATGCCGGAC TCGCTGAACT TTGCTCTGTT GTGACCGAAG CGCCGCCCGA AGTCGTCGGA AGTCCGCATA TGTTGCTGGA TTTCCTTGTG GATCGGATGC TGTCGGGGTA TGAGCAGGAT GATGACGTTA CGGTGCTGGC GATTCACGTC CCTCCGGCCA CGAAGAGTGA CTGA
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Protein sequence | MSAETSVPRP RESGVDISDP GLLQGLLSQS PFAFAFFDPD GRFQRVDEVF ADVVGLPVER LVGRAPGELL SADLTALVEG SVRGVVEGTG VEADQRIRVR TADGQTRHWS LTFSPIHDDK SELRAVCLVG VDITESRQVE EDLRRSEERY RSLVEAQSQL VWITAPTGAV VEDAPQWRAI TGQGLEEYLA HGWLEAVHPD DRPHAEEAWR EALRGRIMFE WNYRVRTRAS GYRHFEVRAV PIIRHGRVVE WVGANTDVTP QREAEEMRGR LTDQLGAAAL RTARLQGATA QLAEALTVEQ VVQVIIDVGR TALAADRSAV ALLDVERAAL KLVNSGGIPD VPGAPGEEIP LSHSSVMTMA VNSRRPVFAE SPDSLRSQLV DAGGDDEAVT GFIDHSDERA WVGLPLLAAG RALGALRFSF TRPQKISQED GVFLEALAGQ CALAVERATL FEREHRTAET LQRSLLPDRL PVVRGLVLAQ RFRSGSRHVQ VGGDWYDAFV LQDGRVAAVV GDVMGKGVKA AAGMGRIRNA MRALALTNPP PAAVLTGLDR VFEATEEEEQ VTTLAYMVVE PGTGEGTLAL AGHPPPLLVS PQGMPLLCDG EPGTPLGWPT SRRQFRFCVP PGHTAVLYSD GLVENRKRGL DAGLAELCSV VTEAPPEVVG SPHMLLDFLV DRMLSGYEQD DDVTVLAIHV PPATKSD
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