Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6921 |
Symbol | |
ID | 8670231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 7629934 |
End bp | 7631913 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003342367 |
Protein GI | 271968171 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCCG CGGGCCACGT GCAGAACGAG ACGGGCCAGC CGTACGTCGG GCTGCGCGCC TTCCGGCAGC AGGACAGGGG CCTGTTCTTC GGCCGCGAGC GGGAGGCGCG CGAGATCGCC ACCCTCTGGC AGGCCGACAG GCTGACCGTG CTCTACGGCG CCTCCGGCGT CGGCAAGACC TCCCTCCTGC ACGCGGGGGT GCTGCCGTTC CTCGGCTCCG ACCGCGTCGA CATCCTGCCG GTGGGCCGGG TCGCCCCGGA CCCGGCTCTC CTCGTCTCCA CCACACCGGT ACGCAGCGTC TACGTCCTGA GCCTGCTGTC CTCCTGGTCC GCCGCGCCGC CCGCCGAACT CGCCGAGCTG ACGGTCCGCG ACTACCTCGA CCAGCGCCCC GCGCGCGTCG ACCGCTACGA CGACCCCATC CCGACGCTCA TCTCCATCGA CCAGGCCGAG GAGATGTTCA CCGGCGCCCC CTACCGGGAG TCCGACCTGG AGGAGTTCGT CGCCCAGCTG GCCGACGCCC TCCAGGCGCA CGCGGGGCTG CGCCTGCTGC TGTCGATGCG CCAGGAGTAC CTCGCCTCCA TCGTGCCCTT CGAACGCGTG CTGGGTCAGG GGTCCCGATC CTGGTTCCAC CTGCTGCCCT TCCGGCGGGA GGCCGCGCTG GACGCCACCC GGCGGCCGCT GGAGGGCACC GACCGCAGGT TCGGCGAGAA CGCGGCCGAG CTGCTCGTGG ACGACCTGCA GACCGTGACG ATCCACAGCG AGCAGGGCGA GAAGACCGTG CTGAGGGTCA GCGGCGTCGA ACCGGTCCAG CTCCAGGTGG TCTGCTCCGC GCTGTGGGAG TCGCTGCCGC CGGACGTCCA CGAGATCACC GTCGACCACG TACGGCTGCA CGCCAACGTC GACCGGTTCC TGGCGGGCTT CTGCCGGCGG ATGCTGAGGG AGGTCGCGGA ACGGCACGGC GTGCCCGAGG GCAGCATCCG ATCCTGGCTC AGGCGCACCT TCATCACCGA GCACGGCACC CGGGGCACCG CCTACGAGGG GCTGCACCAG ACCTCCGGCA TGCCCAACGC CCTGGTCAGG TCCCTGGAGG ACCGCCACAT CCTCAAGGCC GAGTACCGCG CGGGCGCGCG CTGGTACGAA CTGCAGCACG ACCGCCTGAT CGCCGCCATC CGGCACACCG ATCCCGAGAC GTTCCTCCAG GCGGCGCGGA CCGCCCTCTC CAGGGCCCAG TGGACCCACG CGCGGGAGCT GACCGAGGAC GCGGTGCGCA CGGCGGAGTT CGACGACCTG GGCGTACGCG CCGAGGCCGA GGCGATCTTC GGTGACGTCG CGGTCGGCAC CGGGGATCCG GCGACCGCGT GGAGACGCTA CGACGCGGCG GCGGAGATGT TCGCCGTGCT GCAGCGGGCC GACGGCGTGG GCCGGGTCCT CGCCGCGAAG GGCCGCCTGT CACTGAACCT GGGCGACTAC CCCACGGCGG TGAGCGCGCT CAGCGCCGCC GTCGCGAGGG TACCGGGCGA CATGTCCGCG CAGACCGCTC TCGCGCAGGC GCTGTGGCAC GTCGGGCAGC CGCGCTCGGC CCTGATCGTC CTGAACGGCG CCCTCGCCGT CGGGGGCGAC GCCCTGCTGG ACGCCCTGGC CCTTCGCGGG GTGATCCTCG CCGACCTGGA CCAGCCCGAG GCCGCGCTCC GCGACCTCGA CCTCGTCCGC CAGCACCAGC AGCCCGCGAC CCTGGCGGCC CGCGCGCTGG CACTGGCCCT GGCCGGCCGC TTCGACGCCG CGGAGCAGGA GGCGGCCGAC GCGATCGCGA ACGCCGGGAG CAACGGCCCC GTGCTGCTCC GGGCCGCCCG TATCCGCGTC ATCCTCGGCA ACGCCGTGGC GGGCGCGGAC CTGGCGGCCC AGGCGATCAG AGCGGACGAT CCCGCCCTTC CCGAGCATCT GCGGGAGCAG GCCCGTCGTC TGCTTCCGCC GCCGAACTGA
|
Protein sequence | MTSAGHVQNE TGQPYVGLRA FRQQDRGLFF GREREAREIA TLWQADRLTV LYGASGVGKT SLLHAGVLPF LGSDRVDILP VGRVAPDPAL LVSTTPVRSV YVLSLLSSWS AAPPAELAEL TVRDYLDQRP ARVDRYDDPI PTLISIDQAE EMFTGAPYRE SDLEEFVAQL ADALQAHAGL RLLLSMRQEY LASIVPFERV LGQGSRSWFH LLPFRREAAL DATRRPLEGT DRRFGENAAE LLVDDLQTVT IHSEQGEKTV LRVSGVEPVQ LQVVCSALWE SLPPDVHEIT VDHVRLHANV DRFLAGFCRR MLREVAERHG VPEGSIRSWL RRTFITEHGT RGTAYEGLHQ TSGMPNALVR SLEDRHILKA EYRAGARWYE LQHDRLIAAI RHTDPETFLQ AARTALSRAQ WTHARELTED AVRTAEFDDL GVRAEAEAIF GDVAVGTGDP ATAWRRYDAA AEMFAVLQRA DGVGRVLAAK GRLSLNLGDY PTAVSALSAA VARVPGDMSA QTALAQALWH VGQPRSALIV LNGALAVGGD ALLDALALRG VILADLDQPE AALRDLDLVR QHQQPATLAA RALALALAGR FDAAEQEAAD AIANAGSNGP VLLRAARIRV ILGNAVAGAD LAAQAIRADD PALPEHLREQ ARRLLPPPN
|
| |