Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6733 |
Symbol | |
ID | 8670042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 7410022 |
End bp | 7410666 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | membrane protein, DedA family |
Protein accession | YP_003342185 |
Protein GI | 271967989 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.413626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.259565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGCC AGTTGGACCC ATATCTGGTC GGCGCGGTGC TGCTGGCGGT GCTCGCGCTG GACGGTTCCC TGCTGATCGG GGCCGTGCTC CCCGGGGACG CGGCGATCGT CGTGGCGGGG ACCGCGCTGA CGGGCCCCGC CGAGATCGCG GTGGCGGCGG TCGCCGGGGT GATCGGGTGC TACCTGGGCG CCACCGGCGG CTGGATGATC GGCCGCCGGT ACGGCTCGCG CGTCCGCCAC AGCAGGGCCG GGCGGTGGAT CGGCGAGCAC CGCTGGGCGC GGGCCGAACG GATGGCCACC GGCGAGGGCG GCGGCCCCGC CCTCGCCGCC TCCTACTTCC TGCCGGTGGT CAACGCGCTG ACCCCGGTCC TCGCCGGGAC CCTCGGCGTG CCGTACAGCC GGTTCATCCG CTGGGCGCTG GCCGGCAGCG TGGCATGGGT GAGCACCTAT CTCGTGCTCG GCTCCCTCGC GGGGGAGTTC GTCCGGCAGA ACGAGCACCT GATGGTGCCG GTCGCCGGAT GCGTCGCCAT CCTGGCCGCG GGCCTCGCCG TGATCAGCCG GCGGGCCCGC GCGGACAGGA GGGCACAGGT CAGCGAGCCG GGTGGTTCTC CAGCACCGCA GACCGTTTCG CCACCGCCTC AGTGA
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Protein sequence | MLGQLDPYLV GAVLLAVLAL DGSLLIGAVL PGDAAIVVAG TALTGPAEIA VAAVAGVIGC YLGATGGWMI GRRYGSRVRH SRAGRWIGEH RWARAERMAT GEGGGPALAA SYFLPVVNAL TPVLAGTLGV PYSRFIRWAL AGSVAWVSTY LVLGSLAGEF VRQNEHLMVP VAGCVAILAA GLAVISRRAR ADRRAQVSEP GGSPAPQTVS PPPQ
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