Gene Sros_6685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6685 
Symbol 
ID8669994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7360267 
End bp7361205 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342137 
Protein GI271967941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.108203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.127548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACGG GGAGCGTTGC GGGTGAGGCG GCCAGGGGCT GCGCGCACCC TCGGGGATGC 
CACACGGGCG ACCTGCCGGT TCTCGCCAGC GCGACGGTAG GAGCCCGGTT CTGGCTGCTC
ATCGAGCATT CCGGCCCCTG GGCCTCCCAC CTGGAGGACT GCCGCCTTCC CGAAGACGTG
CACACTCTTA TCAAACGGGC CACGCACCTC GGCATCCGGC CCCAGCTCAT CCGCCGCCCG
GGGCGGAGAA ACCCCCACGG GACCGGCATT CACGTCATGG TCGCCGACTC CACGGCCGCC
CAACCGTGGC TCGCAGAGGG CGTCATCGCA GGTCCAGACG ATCTTGACAT GGACGCTTTG
GTGGCCGGAG TGGTCCCGGA GTCCTGCATA CTTGTGAGTG AGCCGGTTTT TCTGGTCTGC
ACGCATGCCA AGCGCAACGC GTGCTGCGCC CGCATTGGAC TACCCCTCGC TCGCGCTCTG
GCGGAAATGT TGCCAGACAG AGTATGGGAA ACATCACATG TTGGCGGCGA TCGATACGCC
GCCAACCTCG TGTGCTTGCC ACACGGGCTT TACTACGGCA GCATGTCTCA GGCTGCTGCG
ATCGCGGCAG CCGACGCGTA CCGGTCCGGC GAGGTCATCC TCGACCGTTT CCGGGGACGC
GCAGGCATCC CTGAGCCATT GCAAGCCGCC GAGCATTTCG TCCGCTCCCA CACGGGCGAG
CTCTCGGTCG GCGGAGTGGC CGTGGAATCC TCCAGGTCGG ACGGCGACAC CACCGAGGCG
TTCGTGCGCG GTAGTGACGC TCGTTTTCGG GTAGTGGTTG AACCCATGAC GCTAACAACG
CCATGTGGTA CGGCTTGCGC CGACACGATC ACTACCTATC GGCTGGTCAC GCTGGACAGG
CTCGCGCCTG TGCGGTACGC CACGTCCGCC CTCACCTGA
 
Protein sequence
MATGSVAGEA ARGCAHPRGC HTGDLPVLAS ATVGARFWLL IEHSGPWASH LEDCRLPEDV 
HTLIKRATHL GIRPQLIRRP GRRNPHGTGI HVMVADSTAA QPWLAEGVIA GPDDLDMDAL
VAGVVPESCI LVSEPVFLVC THAKRNACCA RIGLPLARAL AEMLPDRVWE TSHVGGDRYA
ANLVCLPHGL YYGSMSQAAA IAAADAYRSG EVILDRFRGR AGIPEPLQAA EHFVRSHTGE
LSVGGVAVES SRSDGDTTEA FVRGSDARFR VVVEPMTLTT PCGTACADTI TTYRLVTLDR
LAPVRYATSA LT