| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6655 |
|---|
| Symbol | |
|---|
| ID | 8669964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7323681 |
|---|
| End bp | 7326470 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | putative monovalent cation/H+ antiporter subunit A |
|---|
| Protein accession | YP_003342108 |
|---|
| Protein GI | 271967912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.624896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCGC TGCTGATCCT GCACGCCGTC GCGGCGGTGT GCGCCCCGGC GCTGGTCCGC
CGTCTCGGCC GCGACGCCTT CCTCGTGCTC GCCCTGCCGC CCGCGTGCGG GCTGGGCTAC
GCGCTGTGGG TGGCGGTGAG CGGCGTTCCC GTCGAGTCGC GCCACGACTG GGCCCCCGCG
CTGGGGCTCG GGCTGTCCTT CCGCGTCGAC CCGCTGGCCC TCCTCATGAC CTTCCTGGTC
ACGGGCGTGG GCGCCCTGGT CCTGCTGTAC TGCTCCCGCT ACTTCGACGC GGGGGAGGAG
GGGCTCGGCC GCTTCGGCGG GGAGCTGGTG GCCTTCGCCG GGGCGATGCT CGGACTGGTG
GTCGCCGACA ACCTGATCCT GCTGTACGTC TTCTGGGAGC TGACCACGGT CTTCTCCTAC
CTGCTGATCG GCCACGACCC CGCGAGCAGG ACCAGCCGCA GGGCGGCGAT GCAGGCGCTG
ACCGTCACCA CGTTCGGCGG GCTGACCATG CTGGCCGGCA TGGTCGTGCT CGGCGAGACG
GCGGGGACCT ACGAGATCTC GCGGATCGTC GCGGACCCGC CGGCCGGTGG CGCGATCCCG
GTGGCGACGG CGCTGATCCT GGTCGGCGCG CTGTCGAAGT CGGCGATCTT CCCGTTCAGC
ATGTGGCTGC CCGCCGCGAT GGCCGCGCCG ACCCCGGTAT CCGCCTACCT GCACGCGGCG
GCCATGGTGA AGGCGGGAAT CTATCTGATC GCCAGGCTCG GCCCCGCCTT CGGCGGACTG
CCCGTCTGGC AGGCGATCGT CGTACCGCTC GGACTGCTCA CCATGGTGCT GGGCGGCTGG
CGGGCCCTGC GCGAGTACGA CCTCAAAAGG CTGCTGGCCT ACGGCACGGT GAGCCAGCTG
GGGTTCCTGA CCGTGCTGTT CGGCGCGGCC ACCAGGGACA CCGCGATCGC GGGCGTCGCC
ATGCTGCTCG CCCACGCGCT GTTCAAGGCC TCGCTGTTCC TGGTCGTCGG CATCATCGAC
CACTCCACCG GCACCCGCGA CCTGCGCGAG CTGAGCGGTC TGCGCCGTTC GGCGCCCTGG
CTCTGCGCCA CCTCGGTGGC CGCCGCGGCC TCGATGGCGG GGATCCCGCC GTTCCTGGGG
TTCGTCGGCA AGGAGGCCGC GTTCGAGTCG CTGCTCACCG GGCGGCTCGC CGACACCGTG
ACGCTGGCCG GGGTGGTCGC CGGGTCGGTG CTCACCGCCG CCTACAGCCT GCGGTTCCTG
TGGGGGGCCT TCGGCGACCG GCCCGGCCTG GAACCGGTCC CCGCGCACCG CGCCGCCGCG
GCGACGTTCC TGCCGCCCGC GCTGCTCGCC GTACTCGGGC TGGTCGCCGC CCCCTACTCC
GCACGGTACG GCCACGCGAT GGAGGGCTAC ACCGGCACGT TCGCGGGGCC CGGCCACGGC
ACCCACCTCG CGCTGTGGAC CGGCGCGCCC GTGCCGCTGC TGCTGTCGGC CGTCGCGCTG
GCCGGGGGCG TCATCCTCTT CCTGGCCAGG GCGGCGGTGG CGCGTGCCGG GGAGCTTCTG
CACCTGGTCG ACTCCGGCCG CGCCTACTGG GCCGTCGTCC GGGCGCTGGA CCGCTTCGCC
CTCCAGCTGA CCGGCGTCAC CCAGCGCGGC TCGCTCCCCG ACTACCTCAT GATCGCCTTC
GTCGCCATGG CGGGGATCGG CGGCTTCTCG CTGCTGTACG GCCCCGCCCG CGACATCCGG
CTGGACGTGG TGCGCTGGGA GCGCGTCGAG CAGCCCCTCG TCGGCGTCCT CCTCATCGCC
ACGGCGCTCA TCGCGACGCG GGTGAACTCG CACATCGTGC TCGCCCTGGT GGCGGGGCTC
ACCGGGTACG GCGTGGCACT GCTGTTCCTG GTCCACGGCT CACCGGACCT GGCGCTGACC
CAGTTCCTCG CCGAGACGCT GAGCCTGGTG GTGTTCGTGC TGGTGCTCCG CAGGCTCCCG
GTGGGACCGA GGGAGGGCCA GCTCAGAGTG CCCTTCGGCG TGCGCCTGGC CCTCGGGGTG
GTGAGCGGCG TCGTGATCGT CGGGGCCGGG ATGCTGGCGG AGAGCGCGCG CTCGGCGGTG
CCGGTCGGCA GCCTGATGGC CGGGGCCGCC GAGGAGGCCG GTGCCGCGAA CATCGTCAGC
GCGCTGCTGG TGGACATCCG GGCGTGGGAC ACCATGGGGG AGAGCTCCGT GCTCGTCGTC
CTCACCCTCG GGGTGACCAG CCTGATCTTC CTGCGCCGCC GTATGTACGC GCTGGAACGC
CCCTCGGGGA AGGTGCGCAG GGGAGAAGGG ACGCACTGGC TCGCGGCGAC CCTGCCCGTC
GGGCAGCAGG CCGTCGTCCT GGAGATCGTG GCCCGGCTGA TCTTTCACAC GGTGGTGCTG
ATCTCGATCT TCCTGCTGTT CACCGGGCAC AGCTCGGTGG GGGGCGGGTT CGCGGGCGGC
ATCGTGGCCG GGCTCGCGCT GGTCGTCCGC TACCTCGCCG GTGGCCGCTA CGAGCTGGCC
GTCGCGGTGC CGGTCCACGC CGGGGTGCTG ATCGGCATCG GCCTCCTGCT GTCAACGGTC
ACCGCGTTCT GGGGACTGCT GGTCGCCGGC GCGCCACTGG ACATGCTGGC CGCGGACGTG
GCGATCCCGC TGGTCGGCAA GCTCCACCTG TCCACCGTGC TGCTGTTCGA CATCGGGGTC
TACGTCACGG TGGTCGGCAT GGTCCAGGAC ATCCTGCGCA GCCTGGGCGC GGAGCTGGAC
CGGCAGATCG ACGACGAGGA GGGCCGGTGA
|
|---|
| Protein sequence | MEPLLILHAV AAVCAPALVR RLGRDAFLVL ALPPACGLGY ALWVAVSGVP VESRHDWAPA
LGLGLSFRVD PLALLMTFLV TGVGALVLLY CSRYFDAGEE GLGRFGGELV AFAGAMLGLV
VADNLILLYV FWELTTVFSY LLIGHDPASR TSRRAAMQAL TVTTFGGLTM LAGMVVLGET
AGTYEISRIV ADPPAGGAIP VATALILVGA LSKSAIFPFS MWLPAAMAAP TPVSAYLHAA
AMVKAGIYLI ARLGPAFGGL PVWQAIVVPL GLLTMVLGGW RALREYDLKR LLAYGTVSQL
GFLTVLFGAA TRDTAIAGVA MLLAHALFKA SLFLVVGIID HSTGTRDLRE LSGLRRSAPW
LCATSVAAAA SMAGIPPFLG FVGKEAAFES LLTGRLADTV TLAGVVAGSV LTAAYSLRFL
WGAFGDRPGL EPVPAHRAAA ATFLPPALLA VLGLVAAPYS ARYGHAMEGY TGTFAGPGHG
THLALWTGAP VPLLLSAVAL AGGVILFLAR AAVARAGELL HLVDSGRAYW AVVRALDRFA
LQLTGVTQRG SLPDYLMIAF VAMAGIGGFS LLYGPARDIR LDVVRWERVE QPLVGVLLIA
TALIATRVNS HIVLALVAGL TGYGVALLFL VHGSPDLALT QFLAETLSLV VFVLVLRRLP
VGPREGQLRV PFGVRLALGV VSGVVIVGAG MLAESARSAV PVGSLMAGAA EEAGAANIVS
ALLVDIRAWD TMGESSVLVV LTLGVTSLIF LRRRMYALER PSGKVRRGEG THWLAATLPV
GQQAVVLEIV ARLIFHTVVL ISIFLLFTGH SSVGGGFAGG IVAGLALVVR YLAGGRYELA
VAVPVHAGVL IGIGLLLSTV TAFWGLLVAG APLDMLAADV AIPLVGKLHL STVLLFDIGV
YVTVVGMVQD ILRSLGAELD RQIDDEEGR
|
|---|
| |