| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6550 |
|---|
| Symbol | |
|---|
| ID | 8669859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7187163 |
|---|
| End bp | 7188074 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | putative transmembrane binding-protein-dependent transporter |
|---|
| Protein accession | YP_003342006 |
|---|
| Protein GI | 271967810 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000015909 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATTGGCC GGAAGGCGCC ACCAGGGCGC CGGCGCATCC CATGGGGTGT CTACCTGGTT
CTCCTGCCCA CCTTCGCGGC CCTCGCGGTG TTCGCCTACT ACCCCGCACT GAGCGGGATG
CTGCACTCGC TCTACGAGTG GCGCCCCGGC TTCACCTCGC CGTTCGTCGG CCTGGAGAAC
TACGTCACCA TGTTCGGCGA CGACCTGTGG TGGGCGTCGT TCCGCAACAT CGGGATCATC
TTCGTCTGGG CGGTCACGCT CATGTGGGTC TTCCCGCTGC TGGCCGCCGA GCTGGTCATG
TCGCTGTCGA GCGAGCGGCT GCGCTTCGTC TTCCGCACGC TGCTCATCCT GCCGCTCGCC
TTTCCCGCCG TGGTCAACGT GCTGCTGTGG CAGTTCATGT ACGACCCGCG GGACGGGGTC
GTCAACAGCC TGCTGCGCGC GGTCGGCCTG GACGGGCTGG CGAGCAACTG GATCGGCGAC
CCGGACACCG CCCTGACCGC GCTGATGACC GTCGGCTTCC CGTGGGTGGC GAGCCTGCCG
TTCCTGGTCT TCCTGTCCGC GCTGCAGAAC GTGCCCGCGG AGATCTACCA GGCGGCGGAG
GTCGACGGCG CGGGCAGGCT ACGGCGCCTG TGGAGCATCG ACCTGCCGAT GATGCTGCGA
GACGTCAAGC TGCTGCTGGT CATGGCGGTG ATCGCGGTGC TCCAGTACGG CATGCAGGCG
CACATCATGA CCAAGGGCGG TCCTGACAAC GCCACCCAGG TGCCGGTGCT GCGCATGCTC
GACGCCGCCT TCCTGGACAC CGACTGGGGT TACGCGGCGG CTCTCGGCAC CGTGCTGTTC
GTCCTGACCC TCGCGGTGAG CGTCGGCGCG CTGCTCGCCG GAAGGAGGGG AGGCCGGAAT
GCTCGTGCGT GA
|
|---|
| Protein sequence | MIGRKAPPGR RRIPWGVYLV LLPTFAALAV FAYYPALSGM LHSLYEWRPG FTSPFVGLEN
YVTMFGDDLW WASFRNIGII FVWAVTLMWV FPLLAAELVM SLSSERLRFV FRTLLILPLA
FPAVVNVLLW QFMYDPRDGV VNSLLRAVGL DGLASNWIGD PDTALTALMT VGFPWVASLP
FLVFLSALQN VPAEIYQAAE VDGAGRLRRL WSIDLPMMLR DVKLLLVMAV IAVLQYGMQA
HIMTKGGPDN ATQVPVLRML DAAFLDTDWG YAAALGTVLF VLTLAVSVGA LLAGRRGGRN
ARA
|
|---|
| |