| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6547 |
|---|
| Symbol | |
|---|
| ID | 8669856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7181539 |
|---|
| End bp | 7184676 |
|---|
| Gene Length | 3138 bp |
|---|
| Protein Length | 1045 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003342003 |
|---|
| Protein GI | 271967807 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000462957 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTATT CACCACGGAA CCTACGCAAC GCGCTGATCG CTCTCACCCT CGCCCTGCCG
GCGGCGGTGA CGGCCCTGCC CGCCCCCGCG CTCGCCAGGA CCGAGGCGGG CGTCACCGGG
GTCGCCGTCG GCCAGAGCGC CGTCACCGTC ACCGGCAGGG CGAGCGGCCA GGTGGCGCTG
TACGCGCTGG ACACCTGGCA GGACCCCGCG AGCCACACGG GCCTGCAGCC GGTCGCCGTC
GTCGAGCCCC GCGCCGACGG CGCCTTCAGC GCCGAGGTAC CGCGCATGGA CGGCGCGCAG
GACCGGCTGC ACGACAAGTT CCTCGCCGTC GCCGACGGCC AGGTGCTCGG CGACGTGCAC
TACGCCGACG ACCTGCGCTT CCCCTCGGCC AACGACGCCC CCTACCCGCA GGTGCCCGGC
AAGAAGGGCC TGCAGGTCCA GATGACCGAC GACGCCGAGG AGATCGGCGT CGAGCACGCG
GGTATCAACC TGGCACTGGA CTCGGTCATG ATGGCCGGAC CCGGCGCGGC GGGCAACACC
ATCGAGCACG TCTCGCAGGG CAGGACGTAC TACTTCGACA AGGGCGCGGT CGCCGGGCTG
GACGCACAGG TCAAGCCGCT GTCCGACAAC GGCGTCCTGG TCAACCTGAT CGCCATCGTC
TACGACAACA AGGCCGCCAA CTCCGCCGCG CCCAAGCTGA TCCACCCCGA GGCCGAGCGC
GGCAAGGGCA CGGTGTACGC CTTCGACGTG AAGACCGCCG AGGGCGAGGG CTACTTCACG
GCCGCGATGG AGTTCTTCGC CCAGCGCTAC AGCCGCGCCG ACGCCAAGTA CGGCAGGGCC
TGGGGCTGGA TCGTCGGCAA CGAGATCGAC GCCCAGCAGT ACTGGTACAA CATGGGCCCC
CAGGACCGCG ACGTCTTCCT GGAGCAGTAC ACCAGGGCCA TGCGGCTGAC CTGGCAGGCC
GTGCGCAAGT CCGACGCCAA CGCCCGCGTC TACACCTCGC TGACCCACTT CTGGACCGGC
GCCGTGGGCG ACGACCCGAA GTACACCTAC AAGGGCCGTG ACGTGGTGGA GGGCCTCAAC
GCCCTGACCA AGGCCCAGGG CGACTTCGAC TGGAACATCG CCCATCACCC GTATCCGGAG
AACCTGTTCA ACCCGGCGTT CTGGAACGAC AAGACGGCGA CCGACAGCTT CGACACGCTG
CGCATCACGT TCAAGAACAT CGAGCTGCTG CCGCGCTACC TGGCCCAGCA GCACCTGCTC
CACGACGGGC GGCCGCGCCG GGTGATCCTT TCGGAGCAGG GCCTGAACTC CCAGGACTAC
ACCGACGAGC AGCTCAAGCT GCAGGCGGCG GCCTACGCCT ACGCCTACTA CAAGATCGCA
TTTGCTGAGG GGATCGACTC GTTCATCCTG CACAGGCACG TCGACCACAA GCAGGAGGGC
GGCCTCCGCC TCGGCCTGTG GACATGGGAC GACGGGCACG CCGCGCCGTC CAACGCCGGC
GACCGCAAGC CGGTGTACGA AGTGTTCAAG TACATCGACA CCGAGCGCTC GCTCGAGGTG
ACCGAGTTCG CCAAGAAGAT CATCGGGATC TCCGACTGGA AGGACGTCAT CCCCGGCTTC
GACCCGGCGA AGCTGGCGAC CGGGAAGCTC CCGGCCACCG TCGGCGTACA GCTGGACGCC
AGGCCCGCGC TGGAGCGCGT GGTCTCCGAC TTCGAGCGGG ACACCGGCGG CTGGCGGCCC
TCCGACAACG CGGCCGCCGT CGAACGGGTG GCCGTCGACG GCGGGCACGC GCTGCGCGTG
CGCTTCGACC GCGACCTGCC GGGCTGGTCG ATGTACGCCA AGTCGTACAA GGGGACCGAT
CTGGCGCTCG ACCGGCCGCT CGACGCCTCG CTCAGGTCAC AGCTGTCGGT GTCGGTACGG
GTGCCGGAGA ACGCCGGCGA CGGCTTCGAG CCGGGCAACG CCTTCTCCGC GAAGGTCCGC
GTCTACGGCC CGGACGGCGA GGTCGCCGAG GGCGTCGGCG CGATCGACCC CGCCCGCGGC
TGGAACCGGC TCACCCTCGA CCTGTCCCGC TGGGCCGGCC GCAAGGCGAT CTCCCGGGTC
AAGGTGTGGG TACGCGGCTC GGTCGGCTCC GACTGGGCGG GCTCGTACGA GATCGACAGG
CTGAGCCTGG CGGCCGCCGC GGTCCCGGCG GCCGACCGGC GCAACGTCGA GATCACCGCC
GCGACGGGCG AGCGCGGCCG GATCGGCTCC ACGGTGAGCT TCACCGTGAC CAACCACGAT
GTGCTGCCCA TGGCCGGCAA GGTCACTTTG CGGGCCTGCG ACGGGGTGAG CCTCACCCCG
GCCTCGCTCG GGGTGGGCGG CCTGCGGACC GGCGCCGGCC GTACCTTCAC CACCGAGCTG
ACCGCCTACG CGCCGGCCGA CCGGGAGCAC CCGGTGGTGT GCGCGGACTA CCTCAAGCAG
GAGCAGCGGG TCACCTTCCG GCTGCCGCCC GAGGCGGCCT ACGTGCCGCC CTCTCCCGAC
TCCTTCGCCA ACCGGGAGCT GTCCGACGGC TTCGACACCG ACAGCTCGGC CCGCTACCGG
ACGCACCGGG TCGAGCCGGA GAACAAGGAG GTCCCGCAGG TGAACGTCGG CGGCGGCACG
CTGTCGGCGA GCCACGCCTC CGCGAGCTGG TTCGGGCTGC TCTCCTCGGA CGTCTCGCCG
CGCAACCCGG CCTTCAGCAC CGCGATCACG GTCAAGGGAT TCCAGGGGAA CTCCACGGAC
ATGGACACGG TCTACACCGG CCTGGTGAAG GACGGGCGGA CGGACGTGGT GGCCTTCTAC
GTCAACACCC ACAAGTTCGC CGGGTTCGAG GTGCGCGGGC CCCAGGTCCC GGGCGGTCTC
GCGGTGTTCG GCGTCAAGCA GGGGGTGTCG ATCCCGGACG GCGGCCGGTT CGCCCTGTCG
CTGGTCGGGG ACCGGGCGGC CATGTACGCC GACTCCGGCG ACGGCTGGCG GCTGGTCACC
GCCGCCACGC TGGAGCACCT GCCCCGGCTG ACGGACCCGG ACGTGCGGGC GGAATACCGC
TACGGCTTCG GCGTCCGCGG TGACGCCGGC GCCGCCCCGC TGGTGCTCGA CGCGGTCGAG
GGCCGTAGCA TCTCCTAG
|
|---|
| Protein sequence | MPYSPRNLRN ALIALTLALP AAVTALPAPA LARTEAGVTG VAVGQSAVTV TGRASGQVAL
YALDTWQDPA SHTGLQPVAV VEPRADGAFS AEVPRMDGAQ DRLHDKFLAV ADGQVLGDVH
YADDLRFPSA NDAPYPQVPG KKGLQVQMTD DAEEIGVEHA GINLALDSVM MAGPGAAGNT
IEHVSQGRTY YFDKGAVAGL DAQVKPLSDN GVLVNLIAIV YDNKAANSAA PKLIHPEAER
GKGTVYAFDV KTAEGEGYFT AAMEFFAQRY SRADAKYGRA WGWIVGNEID AQQYWYNMGP
QDRDVFLEQY TRAMRLTWQA VRKSDANARV YTSLTHFWTG AVGDDPKYTY KGRDVVEGLN
ALTKAQGDFD WNIAHHPYPE NLFNPAFWND KTATDSFDTL RITFKNIELL PRYLAQQHLL
HDGRPRRVIL SEQGLNSQDY TDEQLKLQAA AYAYAYYKIA FAEGIDSFIL HRHVDHKQEG
GLRLGLWTWD DGHAAPSNAG DRKPVYEVFK YIDTERSLEV TEFAKKIIGI SDWKDVIPGF
DPAKLATGKL PATVGVQLDA RPALERVVSD FERDTGGWRP SDNAAAVERV AVDGGHALRV
RFDRDLPGWS MYAKSYKGTD LALDRPLDAS LRSQLSVSVR VPENAGDGFE PGNAFSAKVR
VYGPDGEVAE GVGAIDPARG WNRLTLDLSR WAGRKAISRV KVWVRGSVGS DWAGSYEIDR
LSLAAAAVPA ADRRNVEITA ATGERGRIGS TVSFTVTNHD VLPMAGKVTL RACDGVSLTP
ASLGVGGLRT GAGRTFTTEL TAYAPADREH PVVCADYLKQ EQRVTFRLPP EAAYVPPSPD
SFANRELSDG FDTDSSARYR THRVEPENKE VPQVNVGGGT LSASHASASW FGLLSSDVSP
RNPAFSTAIT VKGFQGNSTD MDTVYTGLVK DGRTDVVAFY VNTHKFAGFE VRGPQVPGGL
AVFGVKQGVS IPDGGRFALS LVGDRAAMYA DSGDGWRLVT AATLEHLPRL TDPDVRAEYR
YGFGVRGDAG AAPLVLDAVE GRSIS
|
|---|
| |