Gene Sros_6396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6396 
Symbol 
ID8669705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7001148 
End bp7002542 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content75% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003341853 
Protein GI271967657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.283278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0589303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGGGGC GCCGCTCCCT GCGCTCCCGG CTCACGGCCC TGATCACGGT GGCCGTGGCC 
CTCGCCATCG CGGCCTGCGC CGGAACGTGC TGGCTGATCG TCCGCGACGA GCTCTACGAC
CAGGTGGACC GGACGCTCCA GGGCCACCCG AGGGGAGCGC CGCCCGGGGA GAGGCCGCCG
AAGGAGCGGG ACCTGTCCCG GGTCCTGGAG CTGTGCGCGG CCGGGCGGAC GTCCCCGGCC
GGCGGCGACG AGCTGCGGCC CTTCCTGTCC CTGGTGCAGG TGGTCTACCT GGACGGCCGG
CAGTGCGTGC TCGGCCCGAC GGCGGTCGTG GTGACCAGGG CCGACAGGGC GGTGGCGGCG
GGCGGGCCCG GTGACGCCGA GCTGCGCAAC GGCGTCACCG ACGAGGGCGA ACCGGTGCGG
GTGCGGACCG CGAACGTCGC ACCCGGCGTC GCGATGATGG AGTCACGGTC GCTGGCCCAG
ACCGAGTCGA CGCTGACCTG GCTGGCCGGG ATCCTGGCGG GGGTGGCCGC GCTCGGGGTC
CTGGGCGCGG CCCTGGCGGG CCTGCTCATC TCCCGTACGG CGCTGCGCCC GGTCGGCCGC
CTGACCGAGG CCGTGGAGCA CGTCGCCAGG ACCGAGGACC TGGCCACCAG GATCCCCGTC
GAGGGCACCG ACGAGATCGC CAGGCTCGGC ACCTCCTTCA ACGCGATGAC CAGCGCGCTG
GCCGGGTCCC GGGAGCGTCA GCGGCGGCTG ATCGCCGACG CGGGGCACGA GCTGCGCACC
CCGCTCACCA GCCTGCGCAC CAACATCGAC CTGCTGCTGC GCAGCGAGAA CACCGGCCGC
CCGCTCGGCC CGGACCCCAA GCGCAGGCTG CTGGGCAACC TCAAAGCCCA GTTCGAGGAG
ATGTCCACGC TGGTCGGGGA CCTGCTCCAG CTCTCCCGCT CGGAGGACGA GCACGAGCCG
TACGTCGAGG TGGCCCTCCA CGACGTGGTC GAGTCGGCCG TGCGCCGGGC CCGGCTCCGC
GCCCCCGAGA CCCCGATGGA GGTCGGCCTC GGGCCCTGGT ACGTCCACGG GGACCAGGCC
GCCCTGGAAC GGGCCGTGGT GAACCTCCTG GACAACGCGG TGAAGTTCTC CGCGGGCCCG
GTGACCGTAC GGCTGCGCGA CGGTGAGCTG ACCGTCCGGG ACCGGGGGCC GGGCATCCCG
CAGGACGAGC TGCCGTACGT GTTCGACCGC TTCTGGCGGT CCTCCTCCGC CCGGAGCATG
CCCGGCTCGG GGCTGGGACT GGCCATCGTG GCGCAGGCCG TACGGGACGC CGGGGGGGAG
GTCGCCCTGG AGAACGCCGC GGGCGGCGGG ACCCTGGCCA GGGTGCGCCT GCCGGGCTCT
CCCCATCAGA TCTGA
 
Protein sequence
MRGRRSLRSR LTALITVAVA LAIAACAGTC WLIVRDELYD QVDRTLQGHP RGAPPGERPP 
KERDLSRVLE LCAAGRTSPA GGDELRPFLS LVQVVYLDGR QCVLGPTAVV VTRADRAVAA
GGPGDAELRN GVTDEGEPVR VRTANVAPGV AMMESRSLAQ TESTLTWLAG ILAGVAALGV
LGAALAGLLI SRTALRPVGR LTEAVEHVAR TEDLATRIPV EGTDEIARLG TSFNAMTSAL
AGSRERQRRL IADAGHELRT PLTSLRTNID LLLRSENTGR PLGPDPKRRL LGNLKAQFEE
MSTLVGDLLQ LSRSEDEHEP YVEVALHDVV ESAVRRARLR APETPMEVGL GPWYVHGDQA
ALERAVVNLL DNAVKFSAGP VTVRLRDGEL TVRDRGPGIP QDELPYVFDR FWRSSSARSM
PGSGLGLAIV AQAVRDAGGE VALENAAGGG TLARVRLPGS PHQI