Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6215 |
Symbol | |
ID | 8669520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6823810 |
End bp | 6825063 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_003341687 |
Protein GI | 271967491 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACTCG CCGAAGGCAC CTCCACCCTG GCGCCCGCGC AAATACGTAA AACGGCGACC GTCACCGTCG GCCTGCTCAT GGGCGTCTGG GTGATCGACT ACGTCGATCG GGTGATGATG GCCGTCGCGT TGCCGTTCAT CGGCGAGGAG TTCGCGCTCA CCAAGACCGA GCAAGGCTGG CTGATCACCG CCTTCTCCCT GGTCTATCTG CTGTGCCAGG TGCCGGGTGG CATCCTCGCC GACAAGTTCG GCGCCCGCCG CCAACTCATG GTCTCTCTGC TGCTCTGGTC GGTCTTCACC GCCCTCACCG GTATCGCCTG GGGTCTGGCA TCCCTCCTCG TCATCCGTGC TCTCTTCGGC GTCGGCCAGG GCCTCTTTCC CGGCGCGTCC TTCAAGGCCA TCGCGGAACG CACCACCCCC GCCGTCCGCG CCACCGCCGC CGGCGCCATG CTCGCCTCCA ACCAGCTCGG TGCCGGCGTC GCCCCGCTCA TCGTCGCGCC GCTCATCCTC GCCCTCGGCT GGCGCCACAC CTTCTGGGTC ACCGCCGCCG CCGGCGTCGC CATCGGCGTT CTGCTCTGGA AGCTGCTGCC CAAGGCGCTG CCCGCTCACC TCAACGGCTC CGACGTCGTT CAGGACAAGG GGACCGGCCT CGGCGCCGTC ATGCGCTCGC CATCGGTCTG GAAGTTCGCC GCCCTTTTCT GCACCACCAA CATGCTCGGC TACGGCTTGA TCACTTGGGT GCCCAGCTAT CTGCTGGAGG AGCGCGGCAT CTCCCTCATC AACACCGGTG TCATGTCCGC CATCCCCGGC CTGGTCGCGT GCGCGACCGT CTTCCTCGGC GGCTGGCTGT TCGACCACTT CTTCCACGAC AGGGTCCGGC TCTACGTCAT CCCCCTGCTC CTGGTCACCG CCGTGCTCCT GGTGCTCATG CTGATGGCCG ACTCCGCTGT CGGGTTCACC GTCTACCAGA CCCTCGCCAT GGGCGTGGCG GGCCTTTCCT CGATGGGCAT CCTCGGCATG CCCGTGCGCG CCCTGCCGCC CGCCGTCATC GGATCCGGCA TGGGCGTCGT CAACGTCGGC GGTCAGGTCG CCGGTGTCCT CGCCCCCGTC CTCATGGGCT TCCTGGTCGA CAAGTTCTCC TACACCGCTG CTTTCGGCCT GCTCATCGCC ACCACCGTCC TCGGCGCGCT GATCGCGTTG ATCGTGCCCC AGCGCCCTGA GCAGTTCAGC CTCGGAACGA AGGAGCTCGC GTGA
|
Protein sequence | MGLAEGTSTL APAQIRKTAT VTVGLLMGVW VIDYVDRVMM AVALPFIGEE FALTKTEQGW LITAFSLVYL LCQVPGGILA DKFGARRQLM VSLLLWSVFT ALTGIAWGLA SLLVIRALFG VGQGLFPGAS FKAIAERTTP AVRATAAGAM LASNQLGAGV APLIVAPLIL ALGWRHTFWV TAAAGVAIGV LLWKLLPKAL PAHLNGSDVV QDKGTGLGAV MRSPSVWKFA ALFCTTNMLG YGLITWVPSY LLEERGISLI NTGVMSAIPG LVACATVFLG GWLFDHFFHD RVRLYVIPLL LVTAVLLVLM LMADSAVGFT VYQTLAMGVA GLSSMGILGM PVRALPPAVI GSGMGVVNVG GQVAGVLAPV LMGFLVDKFS YTAAFGLLIA TTVLGALIAL IVPQRPEQFS LGTKELA
|
| |