Gene Sros_6194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6194 
Symbol 
ID8669496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6796561 
End bp6797472 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003341666 
Protein GI271967470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.209211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.916696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCA CCGCCGACCG GCCGGTCAGG ACGGTGCCCC CGAAGAAGCC CCGCAAGGGC 
GGCCGGCAGG GGCGCGAGGC GCTGCTGCTG ATGCTGCCCG CCCTGGTGCC CGTGCTGGTG
TTCAGCGTGG GGCCGCTGCT GTACGGAATC TTCCTGGCCT TCACCGACGC GCGCTCCGGG
CGCAACGCGG TCACCTCGTT CGTCGGCCTG TCGAACTTCG GGGACCTGCT GACCGACGGG
GACTTCTGGG CGTCGTTCCG GATCGGGATG ATCTGGGCGG TCTCGGTGAC CGTGCTGCAG
TTCCTGGCCT CGCTGGGGCT GGCGCTGCTG CTCAACCAGA AAATGCGGTT CCGGGGGTTC
GCCCGGGTGC TGGCCATGGT GCCGTGGGCG ATGCCGCCGG TGGTCATCGG GCTGATGTGG
CGGCTGGTCT ACCACCCGGA CGCCGGGATC CTCAACAGCA TGCTGGGCAC CGAGATCGAC
TGGCTCAACG ACTTCTCCAT CGCGCTGCCC GCGGTGATCG TCGTCGGGAT CTGGACCGGC
ATGCCGCAGA CCACGGTGGT GCTGCTGGCC GGGTTGCAGA GCGTCCCCAA GGAGCTGTAC
GAGGCGGTCG AGGTGGACGG CGCGGGTGTC TGGCGCAGGT TCTGGAACAT CACCCTGCCC
CAGCTCCGCC CGGTCATCGT GGCCATCACC TCGCTGGACT TCGTCTGGAA CATCAACCAG
TTCGGGCTGG TCTACGTTCT CACGCAGGGC GGCCCGGGAG GCCAGACCCG CCTGCCGATG
CTGTTCGCCT ACGAGGAGGC CTTCCGCTAC GGCTTCTTCG GCTACGCGGC CACCCTGGGC
GTGGCGATCG TGATCGTCGT GCTGGCCGTG CTGGGCGTCT ACCTCTGGCG GCAGATGCGG
GAGGCGAGCT GA
 
Protein sequence
MTLTADRPVR TVPPKKPRKG GRQGREALLL MLPALVPVLV FSVGPLLYGI FLAFTDARSG 
RNAVTSFVGL SNFGDLLTDG DFWASFRIGM IWAVSVTVLQ FLASLGLALL LNQKMRFRGF
ARVLAMVPWA MPPVVIGLMW RLVYHPDAGI LNSMLGTEID WLNDFSIALP AVIVVGIWTG
MPQTTVVLLA GLQSVPKELY EAVEVDGAGV WRRFWNITLP QLRPVIVAIT SLDFVWNINQ
FGLVYVLTQG GPGGQTRLPM LFAYEEAFRY GFFGYAATLG VAIVIVVLAV LGVYLWRQMR
EAS