Gene Sros_6170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6170 
Symbol 
ID8669472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6770717 
End bp6772555 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341643 
Protein GI271967447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.198655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGGG GACCGCTCCC ACCAGAAAAC CCGCCCCTCC CCCCGCTGCT CCTCCCCCCC 
GTGGACGCGG ACCGGCGCCT GCGGGGGCCG TACACCGCCG GCGGCGCGAT CGCCTCGGCC
CTGGCGTCCG TCGCCCGGCC GGAGCTGGTC GCCCGCTATG ACATCGAGCT GCGGGCCATG
TCACCCGACC TGGACGGGCT GGTCCCCGCC AGGCGGCGGT CGATGGCCGA CCACCTGCCC
AGGGCCGAAC GGATCCTGGT CCACGCGCCC CGCCGCACGC TCCGCCTGTC CAACGGACTC
GCCGAGTTCG TCCGCGAGCA CCTGGCCGAG ACCGGGCCGC GGACGCTCGT CGTGGAGAAC
GTCCACCAGG CCGACCCAAC CGACCACGAG CTGCTGGCGG TGCTGCGGCG GCGGATCTCC
CCGGACCTGC TGACCGTCGT GATCGGCGGG CAGGCCGTAC CGGAGGAGCC CCTCAGCCCG
GAGGAGCACG ACGTCCGGGC CGACGAGCTG GAACGGGAGG GGACGATCGG CGCGCGGCTC
GGCGCGATCC CCTACCACCG CGAGCACGGC ACCGACCCGC ACCGCGCGGT GGAGGCCTTC
CGGTCCGCGG TCGAACGGTG CCTGGACGCG GGCTGTCACG ACGCGGTGGC GGAGCTGGGG
CTGCGCGCGC TGCCGCTGGC CGACCCGGCC GCCGAGCCGG AGACCTGGTG GCGGCTGCTG
CACAGCACCG CCACCGCACT GGGCTCGCTG AACCGCGAGG ACGAGGCCGA AGCCCTGTTC
GACCTGGCCA GGCGGACGAG CGTCTCCCCC GCCACGCACG CCGCGGCCGC CTACTCCACC
GGCATGCTCA AGGTCCGCCA CCACGACCCG GCCCGGCGCG ACCTGGACGC CGCGCTGGCC
TGGGTGAACC AGGCGATCGC CATCTCCACG CTGCTGCCCG ACCCGCGCGA GCGCGCTTTC
AAACTGGGTT TCGACCTCAA CGGCCGGGCC CTGGTGGAGG TACGGCTCGG CAACCCCGCC
AGGGCTCTGG AGCTGGTCCA GGAGGCGGTG GAGCTGGCCG AGCACGGCCT GGAGCCGGGC
GAGCACCCGA TCCACCGGCT GGTGCTGCTG GCCAACCGGG CGCAGCTCGC CGTCATGCTG
GGCCGTCCCG AGGACGCGCT GGAGGATCTC GACGCGGTGA TCGCGGCCGA CCCCGGCTAC
CCCGACTACT ACATCGACCG GGGCAACCTG CTGCACCGGC TGGGCAGGCG GGAGGCGGCG
ATCGCCGACT ACGAGACGGC GATGCGGGTC GGCCCGCCCT TCCCCGAGCC GTACTACAAC
CGGGCCGAGA TCCGCTTCTC GACCGGCGAC CACCGGGGCG CGCTCGCCGA CCTGGACCAC
GCCCTGGAGC TGGACCCGGA GTTCGTGGAC GGGCTCGCCA ACCGGGCCGG GCTGCTGGCC
GCGCTCGGCG AGTACGGCAG GGCCAGGGCC GATGCGGAGA GCGGGCTCGC GCTGGACCCG
GTCAACCCGT ATCTGCTGTG CGCGCTGGGC CAGGTCGAGA TGGCCGAGGG CCGCCACAAG
GAGGCGCGGG CCGCGTTCGA CCATGCGCTG GAGCGTTCCC CCTCGCTCGC CGCGGCCTGG
GCCAGCCGGG GGATGCTGGC GTTCGAGACC GGCGACCCGG AGGGCGCGGT CGCCGACTTC
ACCCGCGCCC TGGAACCCGG CGCGGATCCC GCACTGCTGT TCAACCGCGC GATGGCGCTG
CGCGCCGCCG GGCGGGAGGA GGAGGCGGTG GCCGATCTCA CCCGCGCGCT GGAGCTGGCG
CCGGACGACG ACGACATCAA GCGGGAGCTG GCGGGCTGA
 
Protein sequence
MSRGPLPPEN PPLPPLLLPP VDADRRLRGP YTAGGAIASA LASVARPELV ARYDIELRAM 
SPDLDGLVPA RRRSMADHLP RAERILVHAP RRTLRLSNGL AEFVREHLAE TGPRTLVVEN
VHQADPTDHE LLAVLRRRIS PDLLTVVIGG QAVPEEPLSP EEHDVRADEL EREGTIGARL
GAIPYHREHG TDPHRAVEAF RSAVERCLDA GCHDAVAELG LRALPLADPA AEPETWWRLL
HSTATALGSL NREDEAEALF DLARRTSVSP ATHAAAAYST GMLKVRHHDP ARRDLDAALA
WVNQAIAIST LLPDPRERAF KLGFDLNGRA LVEVRLGNPA RALELVQEAV ELAEHGLEPG
EHPIHRLVLL ANRAQLAVML GRPEDALEDL DAVIAADPGY PDYYIDRGNL LHRLGRREAA
IADYETAMRV GPPFPEPYYN RAEIRFSTGD HRGALADLDH ALELDPEFVD GLANRAGLLA
ALGEYGRARA DAESGLALDP VNPYLLCALG QVEMAEGRHK EARAAFDHAL ERSPSLAAAW
ASRGMLAFET GDPEGAVADF TRALEPGADP ALLFNRAMAL RAAGREEEAV ADLTRALELA
PDDDDIKREL AG