Gene Sros_6049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6049 
Symbol 
ID8669343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6629573 
End bp6630220 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content72% 
IMG OID 
ProductPhosphatidylserine decarboxylase 
Protein accessionYP_003341525 
Protein GI271967329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0273908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCACG ATTCAGCAAG CCACCAGCCA GGCCGGGTAC GGCTGGCACG TGGCGTCTCC 
CCGTGGTTGC TCCCGACTGT GACCGCCGCC GCAGTGACCT CACTGCTCAG CCGCCGTGAC
CGGCGCTGGG CGCTGGCGGC GGCCCCCCTG GCCGCGCTCA CCGGTGGCAT GCTCTGGTTC
TTCCGCGATC CCGAGCGCAC GCCGGGGTCG GCGCGGATCC TGTCGCCCGC CGACGGCGTG
GTGCAGAGCA TCGACCCCTG GCCGGACGGC CGCACAAGGG TGGCCATCTT CATGAGCCCC
CTGGACGTGC ACGTCAACCG TGCGCCGCTG GCCGGCACGG TCACCTCGGT GGAGCACGTG
GCCGGAGGGT TCGTGCCCGC CTTCAACAAG GACAGTGACA AGAACGAGCG GGTCGTGTGG
CACCTGGACA CCGCGCTCGG CGACATCGAG CTGGTCCAGA TCGCCGGCGC GGTCGCGCGC
CGCATCGTGC CCTACCTGGC GGCCGGGGCG AAGGTGGCCA AGGCCGAGAG GATCGGGCTC
ATCCGGCTCG GCTCGCGCGT GGACCTCTAT CTTCCCGAGG GAATCGTCCC CGCCGTGTCG
GTCGGCCAGC GGACCGTCGC GGGGGTGACG GCTCTTGACC ACGGCTGA
 
Protein sequence
MSHDSASHQP GRVRLARGVS PWLLPTVTAA AVTSLLSRRD RRWALAAAPL AALTGGMLWF 
FRDPERTPGS ARILSPADGV VQSIDPWPDG RTRVAIFMSP LDVHVNRAPL AGTVTSVEHV
AGGFVPAFNK DSDKNERVVW HLDTALGDIE LVQIAGAVAR RIVPYLAAGA KVAKAERIGL
IRLGSRVDLY LPEGIVPAVS VGQRTVAGVT ALDHG