| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6012 |
|---|
| Symbol | |
|---|
| ID | 8669306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6587327 |
|---|
| End bp | 6588280 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_003341489 |
|---|
| Protein GI | 271967293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00798701 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.725662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTGA CCGACAAGCA ATCGACGGCC CCGTCCGCGA CGGGCACGGC AGACACCGTC
GCGCCGCGCT CGTTCGGCGA CGTCGTGAAG GCCTATGTCG CCCTCACCAA GCCGCGGATC
ATCGAGCTGC TGCTGATCAC GACGCTGCCG GTGATGTTCC TGGCCGCCCG CGGTCTGCCA
CCGCTGTGGA TCGCCGTCTC CACCCTGGTG TTCGGCACCC TGTCGGCGGG CAGCGCGAAC
GCGCTGAACT GCTACATCGA CCGTGACATC GACGCCGCGA TGCGCCGTAC CCGGCGCCGC
CCGCTGGCCC GCGACCAGGT CCCGCCGGCC AACGCGCTGA TCTTCGGCGT CGTCCTCGGC
GTGCTGTCGA CTCTTGGTCT GGGGTTGACG GTGAATTGGC TCGCGGCCGG CCTGTCGCTG
GCGGCGAACC TGTTCTACGT CCTCGTCTAC TCGATGATCC TGAAGCGGCG GACCTCCCAG
AACGTGGTGT GGGGAGGCCT GGCGGGGTGC ATGCCGGTGC TGATCGGCTG GGCCGGTATC
ACGGGCAGCC TCGACTGGGC CCCGCTGGTG CTGTTCGGCG TGGTGTTCTT CTGGACCCCG
CCGCACACCT GGACCCTCGC CATGCGCTAC AAGGAGGACT ACGCCGCGGC GAAGGTCCCC
ATGCTCCCGG TGGTCGCCAC CGAGCGCCGC GTGGTGCTGG AGAGCATCGC CTACACCTGG
GCGACGGTGG CCTGCTCGCT GCTGCTGTGG CCGATCGCCG GGACCACCCT GCTCTACCCC
GCCGTGGCCG TCGTCCTCGG CGCCGCCTGC CTGTGGGAGG TCTACCGCCT GCTCGGCCGG
GTCAACGCGG GCAAGACCGG CGTGGACCTG CGCCCGATGC GCTTCTTCCA CTGGTCCAAC
GCCTACCTGG CGCTGCTCTT CCTCGCCGTC GCCGTCGACT CGATGCTCGT CTGA
|
|---|
| Protein sequence | MVLTDKQSTA PSATGTADTV APRSFGDVVK AYVALTKPRI IELLLITTLP VMFLAARGLP
PLWIAVSTLV FGTLSAGSAN ALNCYIDRDI DAAMRRTRRR PLARDQVPPA NALIFGVVLG
VLSTLGLGLT VNWLAAGLSL AANLFYVLVY SMILKRRTSQ NVVWGGLAGC MPVLIGWAGI
TGSLDWAPLV LFGVVFFWTP PHTWTLAMRY KEDYAAAKVP MLPVVATERR VVLESIAYTW
ATVACSLLLW PIAGTTLLYP AVAVVLGAAC LWEVYRLLGR VNAGKTGVDL RPMRFFHWSN
AYLALLFLAV AVDSMLV
|
|---|
| |