| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6011 |
|---|
| Symbol | |
|---|
| ID | 8669305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6585915 |
|---|
| End bp | 6587135 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_003341488 |
|---|
| Protein GI | 271967292 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0111505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.791396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAAGG ACCGCCCGTC TGTCGCACTG ATCGCCGGTC TTGTCGTGAC CGGTCTGTGC
GCGCTGGCGT CGTTCTCGTT CGACGTGCTG AACGGTGACC CGGTCTACTT CTTCATCGCC
CTGGCCCTGG CCCTCGCCCC GGTCCCGGTG CTGCTGGCCG CCGTGCTCGC GCTGGACCGC
ATGGAGCCGG AGCCGCGGAG CAACCTGATC TTCGCGTTCG CCTGGGGGGC GGGTGTGGCG
GTCCTGGTCG CGGGCCTCGT CAACTCCTTC AACCTGATCT ACATCGAGAA CACCGTCCGG
CTGGGCTATG ACAGCTCGCG CAACATCGCC GCCACCTTCG GCGCCCCCGT GGTCGAGGAG
ACGATGAAGG GGCTGGTCCT GCTGGGCCTG CTCAGGTTCA AGCGGGCCGA GCTCGACGGG
CCCACCGACG GCATCATCTA CGCCAGCATG GTCGGCCTCG GCTTCGCGAT GAGCGAGAAC
GTCAGCTACT ACGTGGCCGC GCTCGACGAC ATGGGCGCGC AGGGGCTGGC GGTGACCGTC
GTGCTCAGGG GGATCCTGTC GCCGTTCGCG CATCCGCTGT TCACCTCGAT GATCGGTGTC
GCGGTGGCCT ACGCCGCGCA GCGCCAGGGC CGGGGGCGGG TCGTGGTGAT CGCGGCCGGC
TGGATCGGCG CGATGCTGCT GCACGGGATC TGGAACGGCT TCGCCTCCTA CGTCGGCATC
GGCGGCCTGG CCGTCGCCTA CGTGCTGCTG ATGATCGTGC TTTTCATCCT CATCGGGATC
GTCTTCCGCG ACCGCAAGCG CATCGTCGCC CTCATCCAGA CCTACCTGCC CGCCTACCAG
GCGACGGGGC TGGTCGGCCC CTACGACGTC GCGATGCTCT CCTCGCTGCC GGGCCGCCGC
CAGGCCAGGC AGTGGGCCAG GACGAACGGC GGCCGGGCCG GGCTGCGGGC GATGAACGAC
TACCAGCTCG CGGCCACCGA GCTCGGCCTG CTGCACGAGC GGGCCAGGCG TCACATGATC
GGTGAGCGCA CGTTCAACGA GGAGCAGCAC GCGCTGCTGG AGTGCATGGC GGGCGCCCGC
GCCCACTTCC CGGTGCCGGC CGGGCAGGCG TCCCCGGACG CCCGGGGCTA CGCCCCGCCC
GGCTACGCCC CGCCCGGCTA CGCCCCGCCC GGCCCCGCCC CGCAGCCTCC GCCCGGCGCG
GGCCCCTCGC CGTACCGGTA G
|
|---|
| Protein sequence | MFKDRPSVAL IAGLVVTGLC ALASFSFDVL NGDPVYFFIA LALALAPVPV LLAAVLALDR
MEPEPRSNLI FAFAWGAGVA VLVAGLVNSF NLIYIENTVR LGYDSSRNIA ATFGAPVVEE
TMKGLVLLGL LRFKRAELDG PTDGIIYASM VGLGFAMSEN VSYYVAALDD MGAQGLAVTV
VLRGILSPFA HPLFTSMIGV AVAYAAQRQG RGRVVVIAAG WIGAMLLHGI WNGFASYVGI
GGLAVAYVLL MIVLFILIGI VFRDRKRIVA LIQTYLPAYQ ATGLVGPYDV AMLSSLPGRR
QARQWARTNG GRAGLRAMND YQLAATELGL LHERARRHMI GERTFNEEQH ALLECMAGAR
AHFPVPAGQA SPDARGYAPP GYAPPGYAPP GPAPQPPPGA GPSPYR
|
|---|
| |