| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5906 |
|---|
| Symbol | |
|---|
| ID | 8669200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6475416 |
|---|
| End bp | 6476270 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator-LysR family |
|---|
| Protein accession | YP_003341384 |
|---|
| Protein GI | 271967188 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0462787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.148596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTTA CGCTGCCGGC CGTACGGGCG TTCGTCGCCG TGGCCAGGGC CGGGTCGTTC
CGGGGCGCGG CCACCTCGCT CGGGGTCAGC CAGCCGACCG TGAGCGCCGC CGTGAAACGC
CTGGAGGCCG GCGCCGGACG GCCGCTGCTG ATCCGCGACC GCGACGGGGT GCGCCTGACC
GAGCTGGGCG GCCGGCTGCT GGCCCACGCC GTGGCGGTGA CGACCGCCGC CGACGAGTTG
GAGGCCCTGC TGGCCGGGGA CACCTCCGGG CTGACCGTGG GATTCATGGG CGAGGCGGCC
GGCACGCGCA CCTCCCGGCT GTTTGACGGG ATACGGCGTG CCTCCGGCAG GGAAGTACGG
CCGCGCCGCT TCGATTTCGA CGACCCGTCG TGCGGCCTGC TGGCCGGGAC CAGCGACCTG
GCCGTGGTGT GGCCTCCGCT GAGCACCGGC GACGCCCTGG AGGTGCTGGT CCTCGGCAGC
GACCGGAGGG CCGTCGCCGT GCCCGCCGGC GACCCGCTCG CCCGGCTGGC CGAGGTCGGC
CCCGCCGACC TGGCCGGCCG CGTCTGGGTG GTGCCCCGCA GCCCCGACCC GGTCTGGCGG
GCCTTCCGTC ATCCGGGGTC CATCGGTGTC GGGGACATCG CAGGTGAGGT GGAGTCCCGC
GCGATCGAGG AGACCCTGGA GCTGGTCGCG GCCGGTCAGG GCATCGCCCT GCTCTCGCAG
AGCACCGACG ACCACTACGC CCGCGCCGGG GTGGTGTTCG TCCTGCTCTC CGACGGATGC
CGCTGCACCA CCGCCGTCGC CTGGCGCCGC GCCGACACCC GGCCGGTGAT CGCCCGGATC
CTCGCCGGAC TCTGA
|
|---|
| Protein sequence | MDVTLPAVRA FVAVARAGSF RGAATSLGVS QPTVSAAVKR LEAGAGRPLL IRDRDGVRLT
ELGGRLLAHA VAVTTAADEL EALLAGDTSG LTVGFMGEAA GTRTSRLFDG IRRASGREVR
PRRFDFDDPS CGLLAGTSDL AVVWPPLSTG DALEVLVLGS DRRAVAVPAG DPLARLAEVG
PADLAGRVWV VPRSPDPVWR AFRHPGSIGV GDIAGEVESR AIEETLELVA AGQGIALLSQ
STDDHYARAG VVFVLLSDGC RCTTAVAWRR ADTRPVIARI LAGL
|
|---|
| |