Gene Sros_5874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5874 
Symbol 
ID8669168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6437777 
End bp6438601 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC-type maltose transport systems permease component-like protein 
Protein accessionYP_003341352 
Protein GI271967156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.103907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.598505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG TCGGGCACGT GCTCGGCCGG ATCGCCTCGG CCGTCCTCCT CGCGGTCGTC 
GCCGCCTTCT TCGCGCTGCC GATGCTCTGG CTGGCCTCGG CGCCGTTCGA CGCACACCCC
TCGATCACGG TGTCGCTCCC GGAGTTCACG CTGGACAACT TCCGGGCCAT CCTCGACAAC
CCCTACGCGC TCGGCTCCAT CGGCAACTCG ATCATCCAGG CGGGCGGCGC GGCGGCCCTC
GTGGTCGTCC TGGCCGCGCT GGCCGCCTAC GCCCTGTCCC GGGTCAGGGT GCCCGGCCGC
GACGCGCTGC TCTACGTGCT GCTGCTGATG TCGTCGGTGG TCACCGGGAC CGCGGCGATG
GTGCCGATCT TCGAGCTGGC CTCCCGCCTC GACCTGGTCG ACACCCATCT GGGGGTCGTC
CTCACCGTCT CCGGTGGCCT GCTCCCCGCG GCGATCTTCA TCCTGAAGGA CTTCATGGAC
GCCACCCCCA CCTCCTACGA GGAGTCAGCG CGGGTCTTCG GCGCCTCACC GCTGCAGATC
CTGCGGCACA TCGTCGTCCC GACGGTGCGG CCGGGCCTGG CCACGATCGC GGTGTGGGCC
GTGGCCAACG TGTGGGGCGG CTTCCTGCTC CAGTACATCC TGCTGCGCGA CCCGGGGAAA
TCCCCCGGCT CGGTCGTCCT CTACACCCTC TACACCGAGG GCGGCCAGCC CGACCTCTCC
CTCATCTCGA CGTTCTCGCT GCTCTACTCG CTGCCGGTGG TACTGATGTA CCTGTTCGTC
AGCAGCAGGT ACGGCTTCCG CTTCCATGGA GGGATCAAGC GGTGA
 
Protein sequence
MNLVGHVLGR IASAVLLAVV AAFFALPMLW LASAPFDAHP SITVSLPEFT LDNFRAILDN 
PYALGSIGNS IIQAGGAAAL VVVLAALAAY ALSRVRVPGR DALLYVLLLM SSVVTGTAAM
VPIFELASRL DLVDTHLGVV LTVSGGLLPA AIFILKDFMD ATPTSYEESA RVFGASPLQI
LRHIVVPTVR PGLATIAVWA VANVWGGFLL QYILLRDPGK SPGSVVLYTL YTEGGQPDLS
LISTFSLLYS LPVVLMYLFV SSRYGFRFHG GIKR