| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5710 |
|---|
| Symbol | |
|---|
| ID | 8669004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6244784 |
|---|
| End bp | 6245791 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003341201 |
|---|
| Protein GI | 271967005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.151706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGGA CCTCTCGCCC ACCGGCCGGC GGGCGCCTGC TCACCGGCCG GGGGCTCCCG
GGCCGGGCGC GCGGCGCGTT CGTGCTGCGG CACCTCGTCC GCTTCGTGAT CTCGCTGGCC
GTGCTGCTCG TCGCGTCGTT CGCGATGATC CACCTGATCC CGGGCGACCC GGTGCGCGCC
TCGCTCGGCC CCGCCGCGCC GGTCGAGCTG ATCGCCGCCA GGCGGGCCGC GCTCGGGCTG
GACCAGCCGC TCCTGTCCCA GCTGGTGTCC TACGTCCGCA ACGTGCTGGG CGGAGAGTTC
GGCACGTCGT TCCTCAGCGG GGAACCGGTC GGCGAGGTCA TCGCCGCCCG GCTCCCCAAC
ACGCTCGTCC TCGCCCTGCT CGCGACCGTC GTGGCCCTGC TCGTCGCGGT GCCGCTCGGC
ATGTGGGCGG GGGTCCGCAC CGAGAACGGC CGCAACCGGG GCACCGAGGC GACCTTCACC
TCCACGACAG GCGCGGCCGT CGCCGTACCC GAGTTCCTCT ACTCGATCGC CCTGGTGACG
GTGTTCGCGA TCGGCCTCGG CTGGTTCCCG CCCGCCGGCA GGGGCGGGCC CGAATCGTAC
GTGCTGCCGA TCCTCGCCCT GGCCATCGCG CCGACAGCGA TGATCGCCCG CATCTCCCGG
GTGGAGACGC TGCGCGAGCT GAGCACCGAC TACGTGAGGC TGGCGCGTGC CAAGCGGCTG
CCCGCCGCCC GGCTGTACGT GCGGCACGTC CTGCCCAACA CGCTCACCGC GACCCTCACC
GTGGGCGGCC TGCTGCTCAC CAGCCTGATC GCCGGGAGCG TGCTGGTCGA GTTCGTCTTC
GCGTGGCCGG GTCTCGGCCT GCGGATCGTG GAGTCGATCA CCCAGAAGGA CTATCCGGTC
GCCCAGGGCG TGATCCTCGT CTACGGCGCG ATCGTGCTCG CGGTGAACCT CCTCGTCGAC
CTGCTGCTCG GCGTGCTCGA CCCCACGTCC GCCCTGAAGG AGAGCTGA
|
|---|
| Protein sequence | MAGTSRPPAG GRLLTGRGLP GRARGAFVLR HLVRFVISLA VLLVASFAMI HLIPGDPVRA
SLGPAAPVEL IAARRAALGL DQPLLSQLVS YVRNVLGGEF GTSFLSGEPV GEVIAARLPN
TLVLALLATV VALLVAVPLG MWAGVRTENG RNRGTEATFT STTGAAVAVP EFLYSIALVT
VFAIGLGWFP PAGRGGPESY VLPILALAIA PTAMIARISR VETLRELSTD YVRLARAKRL
PAARLYVRHV LPNTLTATLT VGGLLLTSLI AGSVLVEFVF AWPGLGLRIV ESITQKDYPV
AQGVILVYGA IVLAVNLLVD LLLGVLDPTS ALKES
|
|---|
| |