Gene Sros_5708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5708 
Symbol 
ID8669002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6242269 
End bp6242961 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter nucleotide binding/ATPase protein (oligopeptide) 
Protein accessionYP_003341199 
Protein GI271967003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0205731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCA AGAACCTGAC GGTGCGGTTC GGCGCGTTCA CCGCCGTCGA CGACGTCACG 
CTGGAGATCC CGGCCGGGGC GATCGTCGGC CTGGTGGGGG AGTCGGGGTC GGGCAAGTCC
ACGCTGGCCA GGGCGGTGAC CGGGCTGGTG CCGTACACCG GCGAGATCAC CGGCGGCGAT
CCGCGGCGGA TCCAGATGGT CTTCCAGGAT CCCTACGCCT CCCTTGACCC GCGGATGACC
GTGGGCGCGT CGGTGGCCGA GGGACTCCGC GTGCCCCGCG CCGCCCGCCA GGCGGAGGTG
GAGCGGCTGC TGTCGCTGGT GTCGCTGCCC GCCGCGCTGG CGGGGCGCTA CCCGCGCGAG
CTGTCCGGCG GTCAGCGGCA GCGGGTGGCG GTCGCCCGGG CGCTGGGCGC GCGCCCCGAA
CTGCTGGTCG CCGACGAGAT CACCTCTGCC CTGGACGTCT CCGTCCAGGG CTCGGTGCTC
AACCTGGTCC GCTCGCTGCG CGAGGAGCTC GGGCTGTCGA TGCTGTTCAT CTCGCACAAC
CTCGCCGTGG TCCGGTACGT CTCCGACGTC GTCGCGGTGA TGCACCGGGG CAGGCTGGTC
GAGATGGGGA CGACCGAAGA GGTGGTGGGC TCGCCCCGGA ACGACTACAC CCGCTCCCTG
CTGGAGGCGG TGCCCCGCCT CAGGCACGCC TGA
 
Protein sequence
MIIKNLTVRF GAFTAVDDVT LEIPAGAIVG LVGESGSGKS TLARAVTGLV PYTGEITGGD 
PRRIQMVFQD PYASLDPRMT VGASVAEGLR VPRAARQAEV ERLLSLVSLP AALAGRYPRE
LSGGQRQRVA VARALGARPE LLVADEITSA LDVSVQGSVL NLVRSLREEL GLSMLFISHN
LAVVRYVSDV VAVMHRGRLV EMGTTEEVVG SPRNDYTRSL LEAVPRLRHA