Gene Sros_5538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5538 
Symbol 
ID8668832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6058100 
End bp6058969 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341035 
Protein GI271966839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.590974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCA GGGTGGGCGA GATCGTGCGC ACGCGGGTAC ACAACCCTGA GGCGATTGCC 
GAGGCGGCGA AGCGACGCGT GCCGGCGTCT TCCGTGGTGG GGGAGCATGG CCGGGCGATG
ATCATCGCTG CGGACCATCC GGCGCGCGGC GCGCTCGGCG CCGGCGGGGA TTCGATGGCC
ATGGCCGATC GGGGCGCGCT CCTGGACCGG CTCTGCGTGG CGCTGGAACG CCCTGGGGTG
ACCGGAGTGA TGGGCACGGC CGACATCCTG GAAGATCTGC TGCTGCTCGG CGTGCTGGAC
GGCAAGTCGG TGTTCGGATC GATGAACCGG GCCGGCCTGG CCGGCTCGAC GTTCGAGATC
GATGACCGCT TCACCGCCTA TGACGCGGAG ACCATCGCCT CCATGGGCTT CGACGGGGGC
AAGACGCTGA CCCGGATCGC GTTGGATGAC GCGGCGACGC CTTCTGTGCT GGAGAACACG
GCCCGGGCCG TGAACGAACT CAACGACCGC AAGCTGATCG CGATGGTCGA ACCGTTCATT
TCCCGATGGA ACAACGGCAA GATCTGCAAT GACCTGTCGC CCGAGGCCGT GATCCAGTCG
ATCACGATCG CCTGCGCGCT GGGGCGACGT ACCGCCTATA CCTGGCTGAA GCTCCCCGTG
ATCGAGGACA TGACCGAGGT TCTGGCGGCA TCGACCCTGC CCGTGTTGCT GCTCGGGGGC
GACGGCACCG ACCCTGAGCA GGTGTTCGCC AGGTGGGAAC GCGCGCTGAA GATGCCCAGC
GCGCTGGGCC TGGTGCCTGG CCGGACGCTG CTGTATCCGG CCGATGGGGA CGTGGCCGGT
GCTGTGGACA GGGCGGTCAG CCTGTTGTGA
 
Protein sequence
MAARVGEIVR TRVHNPEAIA EAAKRRVPAS SVVGEHGRAM IIAADHPARG ALGAGGDSMA 
MADRGALLDR LCVALERPGV TGVMGTADIL EDLLLLGVLD GKSVFGSMNR AGLAGSTFEI
DDRFTAYDAE TIASMGFDGG KTLTRIALDD AATPSVLENT ARAVNELNDR KLIAMVEPFI
SRWNNGKICN DLSPEAVIQS ITIACALGRR TAYTWLKLPV IEDMTEVLAA STLPVLLLGG
DGTDPEQVFA RWERALKMPS ALGLVPGRTL LYPADGDVAG AVDRAVSLL