Gene Sros_5469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5469 
Symbol 
ID8668763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5989281 
End bp5990006 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340969 
Protein GI271966773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0200431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAG TCCCAGCTCG GCAAGGTTCT CTGCGCGAGA GGAAACGGGC GGCGACGATC 
GACGAGATCA AGTCCGTCGC CATCGACCAG CTCGCCGCCG ACTCGGGCCA GATGACACTG
CGCGGGGTCG CGCGAGAGGT GGGCCTGACC GTCCAGTCGC TCTACAACTA CTTCCCGAGC
AGGGAGGATC TGATCACCGC CCTGGTCGCC GACGCGCACA ACGCGCTGGC GGACGCGATC
CAGGCGGCCG GACGGGAGCA CCGGGCGCTG CCCGCGCCCG AGCGGCTGGT GCAGGTCGCC
CTGACCTACC GCCGGTGGGC GGTCGAGCAC CGGGCCCGCT TCCTGCTGAT CTACGGAACA
CCCGTCCCCG GCTACCGGGC GCCCGAGGAA GGGCCGACCA CCGGCGCCGC ACGCAGGCTC
GGCGCCACGT TGATCGAGGT GGTCTTCGGC GACTGGAGCG CGGCCGAGAT GGCCGGGATC
CGCCGGCCCG GCGAGGACGC CCGGCCGGCC TCGGTGCTCG CCACCGCCGC CGAACTGCTC
TCCCCCGGGA TGCCGCCTGC CGCGTTCGGG CTCGGCCTCG ACCTGTGGGG ACGAATCCAC
GGGCTGGTGA TGCTGGAGAT CCTCGGCCAC CTGCCGTGGC TGGGCCCGGA CGCCGAGGCC
AACTACCGCG ACGCCATGAC CCGGGCCGCG GCCGACGTGC AGCGCGTCCG CGAGCACGGC
GCATAG
 
Protein sequence
MSEVPARQGS LRERKRAATI DEIKSVAIDQ LAADSGQMTL RGVAREVGLT VQSLYNYFPS 
REDLITALVA DAHNALADAI QAAGREHRAL PAPERLVQVA LTYRRWAVEH RARFLLIYGT
PVPGYRAPEE GPTTGAARRL GATLIEVVFG DWSAAEMAGI RRPGEDARPA SVLATAAELL
SPGMPPAAFG LGLDLWGRIH GLVMLEILGH LPWLGPDAEA NYRDAMTRAA ADVQRVREHG
A