Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5469 |
Symbol | |
ID | 8668763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5989281 |
End bp | 5990006 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003340969 |
Protein GI | 271966773 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0200431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAG TCCCAGCTCG GCAAGGTTCT CTGCGCGAGA GGAAACGGGC GGCGACGATC GACGAGATCA AGTCCGTCGC CATCGACCAG CTCGCCGCCG ACTCGGGCCA GATGACACTG CGCGGGGTCG CGCGAGAGGT GGGCCTGACC GTCCAGTCGC TCTACAACTA CTTCCCGAGC AGGGAGGATC TGATCACCGC CCTGGTCGCC GACGCGCACA ACGCGCTGGC GGACGCGATC CAGGCGGCCG GACGGGAGCA CCGGGCGCTG CCCGCGCCCG AGCGGCTGGT GCAGGTCGCC CTGACCTACC GCCGGTGGGC GGTCGAGCAC CGGGCCCGCT TCCTGCTGAT CTACGGAACA CCCGTCCCCG GCTACCGGGC GCCCGAGGAA GGGCCGACCA CCGGCGCCGC ACGCAGGCTC GGCGCCACGT TGATCGAGGT GGTCTTCGGC GACTGGAGCG CGGCCGAGAT GGCCGGGATC CGCCGGCCCG GCGAGGACGC CCGGCCGGCC TCGGTGCTCG CCACCGCCGC CGAACTGCTC TCCCCCGGGA TGCCGCCTGC CGCGTTCGGG CTCGGCCTCG ACCTGTGGGG ACGAATCCAC GGGCTGGTGA TGCTGGAGAT CCTCGGCCAC CTGCCGTGGC TGGGCCCGGA CGCCGAGGCC AACTACCGCG ACGCCATGAC CCGGGCCGCG GCCGACGTGC AGCGCGTCCG CGAGCACGGC GCATAG
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Protein sequence | MSEVPARQGS LRERKRAATI DEIKSVAIDQ LAADSGQMTL RGVAREVGLT VQSLYNYFPS REDLITALVA DAHNALADAI QAAGREHRAL PAPERLVQVA LTYRRWAVEH RARFLLIYGT PVPGYRAPEE GPTTGAARRL GATLIEVVFG DWSAAEMAGI RRPGEDARPA SVLATAAELL SPGMPPAAFG LGLDLWGRIH GLVMLEILGH LPWLGPDAEA NYRDAMTRAA ADVQRVREHG A
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