Gene Sros_5464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5464 
Symbol 
ID8668758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5985688 
End bp5986419 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content73% 
IMG OID 
Productshort-chain dehydrogenase 
Protein accessionYP_003340964 
Protein GI271966768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0590758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCA GGGTCGCGCT CGTCACCGGG GGGAGCCGTG GGATCGGCGC CGCCATCGCC 
GTACGGCTGG CCGCCGAAGG CGCCGACGTG GTGATCACAT ACGCCCGCTC GGCCGATCGG
GCGGCGGAGG TCGTCGGGCA GATCGAGGCC GCCGGCGCCC GCGGGCTGGC CATGGCCGCG
GATTCCGCCG ACGCCGGTGC GCTGGTCGCG GCGGTCGAGC GTACGGTCGC CGAGTTCGGG
CGGATCGACA TCGTGGTCAG CAGCGCCGGC ATCGCCCCGT TCGGGCCGCT GGAGGAGGTG
ACGCTGGCCG AGGTCGACAA CACCCTCGCG ATCCATGCCC GCGCCTCGTT CGTGCTGGCG
CAGGCAGCCG CCCGGCACAT GGGGGCGGGG GGCCGGATCA TCTGCATCGG CAGCAGTTTC
GTCGAGCGCG TGCCGTACCC GGGGTGGACG CTCTACGCGA TGAGCAAGTC CGCGCTGATC
GGCCTGACCA AGGGTCTTGC CAGGGACCTG GGGCCGCGGG GGATCACGGC CAACCTCGTC
CATCCCGGTT CGACCGACAC CGAGATGAAC CCGGCCGACA GCCCGGAAGC GGCGGAGGAG
CGACGGTACA CCGCCCTGGA TCGTTACTGC AGCCCCGATG ACATCGCCGC CACCGTCGCC
CATCTGGCGG GTGAGGGCGG CCGGAACATC ACCGGCGCCG CCATCACCGT CGACGCGGGC
ACCACGGCCT GA
 
Protein sequence
MGRRVALVTG GSRGIGAAIA VRLAAEGADV VITYARSADR AAEVVGQIEA AGARGLAMAA 
DSADAGALVA AVERTVAEFG RIDIVVSSAG IAPFGPLEEV TLAEVDNTLA IHARASFVLA
QAAARHMGAG GRIICIGSSF VERVPYPGWT LYAMSKSALI GLTKGLARDL GPRGITANLV
HPGSTDTEMN PADSPEAAEE RRYTALDRYC SPDDIAATVA HLAGEGGRNI TGAAITVDAG
TTA