Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5464 |
Symbol | |
ID | 8668758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5985688 |
End bp | 5986419 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | short-chain dehydrogenase |
Protein accession | YP_003340964 |
Protein GI | 271966768 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0590758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGCA GGGTCGCGCT CGTCACCGGG GGGAGCCGTG GGATCGGCGC CGCCATCGCC GTACGGCTGG CCGCCGAAGG CGCCGACGTG GTGATCACAT ACGCCCGCTC GGCCGATCGG GCGGCGGAGG TCGTCGGGCA GATCGAGGCC GCCGGCGCCC GCGGGCTGGC CATGGCCGCG GATTCCGCCG ACGCCGGTGC GCTGGTCGCG GCGGTCGAGC GTACGGTCGC CGAGTTCGGG CGGATCGACA TCGTGGTCAG CAGCGCCGGC ATCGCCCCGT TCGGGCCGCT GGAGGAGGTG ACGCTGGCCG AGGTCGACAA CACCCTCGCG ATCCATGCCC GCGCCTCGTT CGTGCTGGCG CAGGCAGCCG CCCGGCACAT GGGGGCGGGG GGCCGGATCA TCTGCATCGG CAGCAGTTTC GTCGAGCGCG TGCCGTACCC GGGGTGGACG CTCTACGCGA TGAGCAAGTC CGCGCTGATC GGCCTGACCA AGGGTCTTGC CAGGGACCTG GGGCCGCGGG GGATCACGGC CAACCTCGTC CATCCCGGTT CGACCGACAC CGAGATGAAC CCGGCCGACA GCCCGGAAGC GGCGGAGGAG CGACGGTACA CCGCCCTGGA TCGTTACTGC AGCCCCGATG ACATCGCCGC CACCGTCGCC CATCTGGCGG GTGAGGGCGG CCGGAACATC ACCGGCGCCG CCATCACCGT CGACGCGGGC ACCACGGCCT GA
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Protein sequence | MGRRVALVTG GSRGIGAAIA VRLAAEGADV VITYARSADR AAEVVGQIEA AGARGLAMAA DSADAGALVA AVERTVAEFG RIDIVVSSAG IAPFGPLEEV TLAEVDNTLA IHARASFVLA QAAARHMGAG GRIICIGSSF VERVPYPGWT LYAMSKSALI GLTKGLARDL GPRGITANLV HPGSTDTEMN PADSPEAAEE RRYTALDRYC SPDDIAATVA HLAGEGGRNI TGAAITVDAG TTA
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