Gene Sros_5457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5457 
Symbol 
ID8668751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5980962 
End bp5981636 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID 
Productcobalt import ATP-binding protein CbiO 
Protein accessionYP_003340957 
Protein GI271966761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00770643 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0928666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGT TGGCCGACGT CCATGTGCGG CTCGGGCAGC GTGACGTATT GTGCGGCCTC 
ACGGTCTCGC TGCCGGAACG CCGCGTGGGC ATGATCGGCG CCAACGGCTC CGGCAAGAGC
ACGTTCGCCC GCCTGATCAA CGGCCTGGCC CGGCCGTCCT CGGGCGCCGT CACCGTCCTC
GGGCTCGACA CCCGCCGCCA CGCCGCCCGG ATCAGGCGCA GGGTCGGGTT CCTGTTCACC
GATCCCGACG CGCAGATCGT GATGCCGACC GTGGCCGAGG ACGTGGCCTT CTCCCTGCGG
CGCAAGGGGC TGTCGCGTGA GGAGGTCGAG CGGCGCGTCC AGGAGGTGCT GACCCGGTAC
GGCCTGCGGG AGCACGCCGA CCATCCCGCG CACCACCTGT CCGGAGGCCA GAAGCAGTTG
CTCGCCCTCT GCTCGGTCAT GGTGCTCGAA CCCGACATCC TGGTCATGGA CGAGCCGACG
ACGCTGCTGG ACCTGCGCCA CTCCCGCCAG GTCGCCGACC TGCTGCGGGG CCTGTCGCAG
CAGGTGGTGG TGGTCAGCCA CGATCTGGCG CTGCTGGAGG ACTTCGACCG CGTGCTGGTG
CTGGACCGGG GGCGGATCGT CGCCGACGCC GCGCCGGAGG CCGCGATCGG CCACTACCGG
AAGATCATGT CGTGA
 
Protein sequence
MIELADVHVR LGQRDVLCGL TVSLPERRVG MIGANGSGKS TFARLINGLA RPSSGAVTVL 
GLDTRRHAAR IRRRVGFLFT DPDAQIVMPT VAEDVAFSLR RKGLSREEVE RRVQEVLTRY
GLREHADHPA HHLSGGQKQL LALCSVMVLE PDILVMDEPT TLLDLRHSRQ VADLLRGLSQ
QVVVVSHDLA LLEDFDRVLV LDRGRIVADA APEAAIGHYR KIMS