Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5371 |
Symbol | |
ID | 8668665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5885506 |
End bp | 5886054 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003340877 |
Protein GI | 271966681 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0304187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATGACG ACGGGGTGGC CAGGTTCGAG GCCGTCTACA GGGAGACGTA CGACCAGATC GCGGCCTACG CCGCACGCCG CTGTGACTCT CCGCAGGATG CGGCCGATGT CGTGGCGGAG ACCTTCACCA TTGCCTGGCG CCGGGTGGCT GATCTGCCGC CGGGGCAGGA GGCCAGGCTC TGGCTGTACG GCGTGGCGCG CAAGGTGCTG GCCGACCACC GCCGGAGCAC AGCCCGGCAG CGGCTGCGCA GTGTGGAGCT TGACGCCGAG ATAGCCGATC TCTACGGGGA TTCCCCCGGC AGCAGCGTGG AGCTGAGCGT GATCGGCGCG GTGTTTCGCA GCCTGTCCGA CGACGACCGT GAGCTTCTCT CGCTGGTCGC CTGGGAAGGG CTGGGGCGCG AGGAGATCGC CACGACGCTG GGACTGTCCC GCAACGCCGT ACGCATCAGG TTGTATCGCG CCCGCAGGCG CTTTTCGCGC GCACTCGACG AAGCCAGTGT CCGGTTCACA TCAGAAAGCC GGATGATTCC GGCGGGGAGG TCGCTGTGA
|
Protein sequence | MDDDGVARFE AVYRETYDQI AAYAARRCDS PQDAADVVAE TFTIAWRRVA DLPPGQEARL WLYGVARKVL ADHRRSTARQ RLRSVELDAE IADLYGDSPG SSVELSVIGA VFRSLSDDDR ELLSLVAWEG LGREEIATTL GLSRNAVRIR LYRARRRFSR ALDEASVRFT SESRMIPAGR SL
|
| |