| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5368 |
|---|
| Symbol | |
|---|
| ID | 8668662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5880868 |
|---|
| End bp | 5882868 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003340874 |
|---|
| Protein GI | 271966678 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.100137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0878491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCGGA CCTGTCTGGC GCTGCTCATG GTCCTGACCG CCTTATCGAT ACCGGCCTTG
TCGATACCGG CCTTGTCGAT ACCGGCCGCC GCGCAGGCGA CGGCCGCGCC GAACTGCGAC
ACCCCGGCCG TCACCACGTA CGGCCCGGCC TCCGTCACCG GTGCGATCGT CGGCGCCACC
GTCCACGAAG GCCACGCCTA CGTGGTCTCC CGCGGACCGA AGCCGCCGGT CGTGGCCGAG
ATCGACCTGG CCACCCGCAA GGTGACACGC ACCGCGACCC TGCCGGACGG CCCCGCGGCA
GGCGAGCCGG AAGGCGGCTG GGCCACCGCC GTCGCCGGCG GCAAGCTGTA CATCGGCACC
TACCCCGTAC CCGACCTCTA CAGCTACGAC CTGGCCACGG GCCAGGTAGC GCACCTGCAC
TCCTTCGGCG CGAACGGCGG CTTCGTCTGG AGCATGGCCG CCGCACCGGA CGGCACCCTC
TACCTCGGCA CCTCCTCCGA CGGCAGGCTC TGGGAGTACG TCCCCTCGAC CGGCGCGATC
CGCAGGTACG GTGTGCTGGT CCAGGGCGAG CACTACGTCA GAGCGGTCGC CGCCGACGAG
ACCACGGCCT ACGTCGGCCT GCTGGAGAAG GCCAAGCTGA TGGCCGTCGA CCGGGTCAGC
GGCGCGGTCA GGGAGCTGGC CCAGGGGCCC GCGGCCGTGG GCACGGTCTC GCTCCACGGC
GATCGGGTGC TGGCGGCGAG CGGGAGCACG CTGATCGACG TGCGCAAGGA CGGCACGGAC
CGGCGGCAGT TCGAGGCCGG AGTGGGCATC ATCGACGCGT TCGAGGTGGC CCCCGACGGC
CTGGTCTACC TCACCTCGCG TCCCGACGGC GCCGTCTACA GCTACCGCAC CGGGCAGGAC
GCGGTGACCA AGGTCGCCGA CCCGCCCTCG CGGGGCGAGG AGACCCGGGC ACTGAAGCTG
GCCGGGCAGC AGCTCATCGG CTTCGCCGGC AGCGGCGGTA TGTGGTGGCT GGACCTGCCG
AGCCGGACCT CCGAGTTCGT CGACCTCATC GAAGCCGGCT TCCCGGCCGG CGCCGAGCGG
ACCCAGAGCA TGCTGCTGGT GCCGAACCGG GCCCTCTACA TCGGCGGCCA CTTCGCCGTG
GAAGTGCGCG ACCTGCGGAC CGGAAAGCAG CGCAGAGTCC GCGTGGTGGG CGAGCCGAAG
GCCATGGTGC GACGGGGTGA CAAGATCTAC GCTGCGCTGT ATCCGAGCGG TCAGATCATC
TCCATCGACG TGCACACCGA CGAAGTGCGC GGCCTCGGCT ACATCGGGCA CGACCAGTCA
CGGCCGTGGG ACATCGAGCA CGACCCCGTC ACCGACACCA TCCTGGTGGC CTCCGCGCCG
ACCGGCGCGA AGCTGAAGGG CGCTCTGACG GTGCTCGACC CCGACACGGG GAAGATGGAC
GTCTACCCGG ACGTCATCCC CGACCAGAGC CTGATGAGCC TGAGCGTCGA CTCCAAGCGC
GGCGTCGTCT ACCTCGGTGG CGACGTGCTC GGCGGAGGCG GCACACCGCC GACCAAGACG
ACGGCCTCGA TCGCCGCCTT CGACCTCAAG CAGCGCAAGG TGGTGTGGCA GATCGACCCG
CTGCCGAACC ACCGCACCTT CCAGGACCTC AAGGTGCACA ACGGGCTGCT GTACGCGGTC
TACAAGCGCG TGCTGGGTGC CTGGATCGCC CTGGACCCCG CCACCGGCAC CATCAAGCAC
CAGGGCCTGC TGTCGGGACA CGGCGAACTG CAGGTCCACA AGGGCCGGGT GTTCACCTCC
ACCTACTTCG GCGGTGGCAA CGCCTACGAG CTCGGATCGC AGGCCAAGCT GCTGGCGACC
GGGCTGGGCG ACGAGTGGCA CACCAATCCG CAGCTGCAGT TCGAACCCGG CTCGTTCGAC
GCGTGGACGA TCGTCGGCCG GGATCTGGCG AAGGTACGGC TCGACCCGCG CTGCCCGCCC
GTGCAGATCC CGTCCCCGTA G
|
|---|
| Protein sequence | MPRTCLALLM VLTALSIPAL SIPALSIPAA AQATAAPNCD TPAVTTYGPA SVTGAIVGAT
VHEGHAYVVS RGPKPPVVAE IDLATRKVTR TATLPDGPAA GEPEGGWATA VAGGKLYIGT
YPVPDLYSYD LATGQVAHLH SFGANGGFVW SMAAAPDGTL YLGTSSDGRL WEYVPSTGAI
RRYGVLVQGE HYVRAVAADE TTAYVGLLEK AKLMAVDRVS GAVRELAQGP AAVGTVSLHG
DRVLAASGST LIDVRKDGTD RRQFEAGVGI IDAFEVAPDG LVYLTSRPDG AVYSYRTGQD
AVTKVADPPS RGEETRALKL AGQQLIGFAG SGGMWWLDLP SRTSEFVDLI EAGFPAGAER
TQSMLLVPNR ALYIGGHFAV EVRDLRTGKQ RRVRVVGEPK AMVRRGDKIY AALYPSGQII
SIDVHTDEVR GLGYIGHDQS RPWDIEHDPV TDTILVASAP TGAKLKGALT VLDPDTGKMD
VYPDVIPDQS LMSLSVDSKR GVVYLGGDVL GGGGTPPTKT TASIAAFDLK QRKVVWQIDP
LPNHRTFQDL KVHNGLLYAV YKRVLGAWIA LDPATGTIKH QGLLSGHGEL QVHKGRVFTS
TYFGGGNAYE LGSQAKLLAT GLGDEWHTNP QLQFEPGSFD AWTIVGRDLA KVRLDPRCPP
VQIPSP
|
|---|
| |