| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5255 |
|---|
| Symbol | |
|---|
| ID | 8668549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5768437 |
|---|
| End bp | 5769231 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | NYC1; chlorophyll b reductase |
|---|
| Protein accession | YP_003340767 |
|---|
| Protein GI | 271966571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0552539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.178037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA TGACAGCGAT CGTGATCACC GGCGGTACCC GAGGCATCGG GCAAGGTCTC
GCCCGCGCGT TCGTCGCCCG CGGTTGCAGG GTCGTGATCT GCGGACGTTC CGAAGAGGCG
GCGCGGTCGG CTGCCGGCGC GCTCGGCCCC GGAGTGCTGG GCGTGCGGGC CGACGTCACC
TGCCGGCCGG ATCTGGAGCA GCTCTGGGAG AAGGCCGAAA AGGAGTTCGG CCGGATCGAC
CACTGGATCA ACAACGCCGG TGTCGCGCTC GCGCCGCGGC TGCTGTGGGA CGTCCCCGAA
TCCGATATCC GGAAGGTCGT GGAGGTCAAC ATGATCGGGG CCGTCAACGG CAGTGCCGTG
GCCGCCGAGC GGATGCTCAC CCGCGGCGGA GGTTTTCTAT GGAATATGGT CGGGTTCGGT
AGTAACGGTC GAATTTCCCG TGGAATGGCG CTCTATGGAT CGACAAAAAG GGCGCTGGCT
TATGTGCACG ACACCCTGGT GCTCGAAACC AGGGGAACAC CGGTCCGGGC CGGGCTGCTC
TCACCGGGCA TGGTGGTCAC CGAACTCGTC GCCGAGAACG ACCTGCGCGC CGACCTCCGT
GGCCGCCGCC AGCAGCTGTA CTACGAGGTG CTCTCCGACC CGCTGGACGT CGTCGCGCCC
TGGATGGCCG ACCGCATCCT GTCCGCCCGG CGCAACGGGG CGAGGGTCGA GCGGCTCACC
ACCCCGAAGG CACTCGGCCG GCTGGCCGGA GCGCTGCTCC AAGGACGTGT CCGGCCCGGG
CGCAAGGCGT CCTGA
|
|---|
| Protein sequence | MSGMTAIVIT GGTRGIGQGL ARAFVARGCR VVICGRSEEA ARSAAGALGP GVLGVRADVT
CRPDLEQLWE KAEKEFGRID HWINNAGVAL APRLLWDVPE SDIRKVVEVN MIGAVNGSAV
AAERMLTRGG GFLWNMVGFG SNGRISRGMA LYGSTKRALA YVHDTLVLET RGTPVRAGLL
SPGMVVTELV AENDLRADLR GRRQQLYYEV LSDPLDVVAP WMADRILSAR RNGARVERLT
TPKALGRLAG ALLQGRVRPG RKAS
|
|---|
| |