Gene Sros_5241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5241 
Symbol 
ID8668535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5755194 
End bp5756003 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003340753 
Protein GI271966557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.256202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGG AACAGCCTTC CCGTGTGGGA ACCCTGCTGC GGGAGTGGCG ACAGCGTCGC 
AGGCTCAGCC AGCTCGATCT CGCCAATCTG GCCGACACCT CGGCGCGCCA CCTGTCCTAC
ATGGAGAACG GCCGCGCCCG TCCGAGCCGG AGGATGCTGC TGCGTCTGTC AGTCGCCCTC
GACGTGCCCC TGCGCGAGCG CAACACCCTG CTGCTGGCCG CCGACTACGC CCCCGCCTAC
CGGGAAAGCA GCCTCGACGA CGACTACATG GCCTCGATCC GCTCGGCGCT GGAGACCATG
CTGACGGCCC ATGAGCCGTA CCCCGCCGTC GTGGTCGACC GCCTCTGGAA CGTGCTGCAG
GGCAACCGCG CCATGGGCGT GCTCATGGAC GGCATCCCGC CGCACCTGCT GGAGCCACGG
CCGAACGTGT TCCGGCTGGC CCTGCACCCC GACGGGCTGG CCGCGCGGCT GGCCAACCTG
GGGGAGGTGA GGGAGCTCTT CCTCGAACGG CTGTCACACC AGGTCAACGC CACCGGGGAC
ACCGAGCTCC ACGCGCTCTA CGAGGAGGTG TCGCGCTACC CCACTTCGGA AGACACCCCA
GCCGCCCTGC CCTCGCGACA CCGGCAGAGC CCGATCCAGG TGCCCTTGAG AATCCGCACC
CCGTTCGGCG AGCTGGCGAT GTTCAGCACC ATGGCCACCT TCGGCGCTCC GGCCGATGTG
ACGCTGTCGG AGCTGGCGAT CGAGCTCTTC TATCCCCTCG ACGACTTCAC CGCCAACGCC
CTGCGCGCCC TGCCGCGTGA CGGCGCTTGA
 
Protein sequence
MDVEQPSRVG TLLREWRQRR RLSQLDLANL ADTSARHLSY MENGRARPSR RMLLRLSVAL 
DVPLRERNTL LLAADYAPAY RESSLDDDYM ASIRSALETM LTAHEPYPAV VVDRLWNVLQ
GNRAMGVLMD GIPPHLLEPR PNVFRLALHP DGLAARLANL GEVRELFLER LSHQVNATGD
TELHALYEEV SRYPTSEDTP AALPSRHRQS PIQVPLRIRT PFGELAMFST MATFGAPADV
TLSELAIELF YPLDDFTANA LRALPRDGA