| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5205 |
|---|
| Symbol | |
|---|
| ID | 8668499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5721999 |
|---|
| End bp | 5723552 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis-like protein |
|---|
| Protein accession | YP_003340722 |
|---|
| Protein GI | 271966526 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.51395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACAGCA AGAAGGAGGG TTCGGCGCCG GCCCGGCCAC TACCCGGGAC CCAGGAGGCC
GAGGACGCGC GGCTCGCCCT ACACGGCGGC AGCCCCGTCC GGCGCACACC GTGGCCGACC
TACGACAAGG GAGCCGTCTT CGTCCATCCC GAAGACGAGG AGGCGGCGTT GCGCGCCATC
CGCAGCCACC TCTATTTCCG CTACGACCAC CGAGCCCAGC AGGAGACCGA GTGCGGCAAG
TTCGAGGAGG AACTGTGCCG CTACTTCGGG AGCAAGCACG CGCTGGCCGT GTCGAGCGGC
ACCACCGCGC TCGCGCTCGC CATCATGGCG GCGGGGATCC CGCGGGGCTC CCTGATCGCC
TGCCCCGGCT TCACCTTCGT CGCCACCCCC AGCGCCATCG TCCTCGCCGG GTGCACGCCC
CTCCTGGTGG AGGTGGACGA GAACCTCCAC ATGGACCTCG CCGACCTCCG CCGCCGCTGG
ACACCCGAGA TCAAGGGGAT CCTGGTGGTC CACATGCGCG GCTTCGCCGC CGACATGGAG
GCGCTGACGC GCTTCGCCGC CGAGATGGGC GTGCCGGTGT TCGAGGACGC CGTGCCGGCC
CTCGGCGCCG AGCTGAAGGG CCGCAAGCTC GGCACCTTCG GCCTCGCGGG CGCCTTCAGC
ACCCAGTCGG ACAAGTCGCT CAACTGCGGC GAGGGCGGTT TCCTGGTCAC CGACGACAGC
CTGCTCTTCG CCCGCGCCGT CGTGCTCTCG GGCGCCTACG AAGGGCGCCT CCGGCGGCAT
TTCCCGGACG GTGAGCCGCC GATCAGCACC GATCTCGACC TGCCGCTGCT CAGCTTCCGC
ATGGACGAGA TCCGCGCCGC CCTGCTGCGC GCCGAAATGG AGCGGCTGCC GATCCGCCTG
CAACGCTTCC GCAGCAACTA CGCCCACGTG TCCGCGGCGC TCTCGGACCT CACCGAGATC
GCGATCCGGC AGCCGGTGGC CCCCGGCGCC TACCTCGGCG AGGCGTTCAT CTTCCGCGTG
CCGGGCGGGG ACGCGAAATG GTTCGCCCAC GCGCTCTGCT GCGAGGGCAT CGACGCGCGC
AACCTCGGCT CCGACGAGGA CACCAACGTG CGGGTCTTCT GGAACTGGCG GTTCATGTTC
GACACCAAGG ACGTCGCGGC GATCAAGGCG CTGCTGCCGG ACACCACGCG GCACCTGGAG
GAGGCCGTCG ACATCCCCCT GTCCTCCAGT CTCTCGGCGG AGGACTGCGA TCACCTGGTC
AAGGCGGTCC GCAAGGTGGC GGGCGCCGTC GGACCGGACC GGCGCCGGCC GGACCCGGCG
CGGGACGGCC GGCGCAACGG CCGCGGTCAC GAGCCCGACG GCCAGGGCGC CGACCGGCCG
GGAGAGCCCG CCCCGGCGAC CGTGGCGGCC ACGGCCCCGG CGACCGCGGC CACCACGGCG
ACCGCGACGG CCCCGGCGAC TGCGGCGGCC ACGGTTACCA CGGCGGCCCC GGCGACTGCG
GCGGCCACGG TTACCGCGGC GGCCGATACC GTCCGGGCCG GGCAGCGGCG ATGA
|
|---|
| Protein sequence | MDSKKEGSAP ARPLPGTQEA EDARLALHGG SPVRRTPWPT YDKGAVFVHP EDEEAALRAI
RSHLYFRYDH RAQQETECGK FEEELCRYFG SKHALAVSSG TTALALAIMA AGIPRGSLIA
CPGFTFVATP SAIVLAGCTP LLVEVDENLH MDLADLRRRW TPEIKGILVV HMRGFAADME
ALTRFAAEMG VPVFEDAVPA LGAELKGRKL GTFGLAGAFS TQSDKSLNCG EGGFLVTDDS
LLFARAVVLS GAYEGRLRRH FPDGEPPIST DLDLPLLSFR MDEIRAALLR AEMERLPIRL
QRFRSNYAHV SAALSDLTEI AIRQPVAPGA YLGEAFIFRV PGGDAKWFAH ALCCEGIDAR
NLGSDEDTNV RVFWNWRFMF DTKDVAAIKA LLPDTTRHLE EAVDIPLSSS LSAEDCDHLV
KAVRKVAGAV GPDRRRPDPA RDGRRNGRGH EPDGQGADRP GEPAPATVAA TAPATAATTA
TATAPATAAA TVTTAAPATA AATVTAAADT VRAGQRR
|
|---|
| |