Gene Sros_5169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5169 
Symbol 
ID8668463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5684469 
End bp5685224 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID 
ProductNmrA-like protein 
Protein accessionYP_003340690 
Protein GI271966494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.269967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0024207 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATCG TGGTAATCGG CGGAACCGGC CTGATCGGAT CGAAGCTCGT GACGGAGCTG 
GGCGAGCACG GTCACGAGGC GGTGGCGGCG GCGCCGAACA CCGGCGTCAA CACCCTCACC
GGCGAAGGGC TGGCCGACGT GCTGGCAGGT GCGCAGGTGG TGATCGACGT GTCGAACTCG
CCGTCGTTCG AGGAGAAGGC GGTGCTGGAG TTCTTCGAGA CCTCCACCCG CAACCTGCTC
GCCGCGGAGG CGGCGGCGGG CGTCGGCCAC CACGTCGCGC TTTCGGTCGT GGGAACGGAG
CGGCCGCCCG GGAACGCCTA CTTCCGGGCG AAGATCGCCC AGGAGCAGCT GATCGAGAAG
TCGCCGATCC CGTTCTCGCT CGTGCACGCC ACCCAGTTCT TCGAGTTCGT CCGGAGAATC
GCCGACGAGG CCACGGACGG CGGCAAGGTG CGGATGGCGC CCGTGCTGTT CCAGCCCATC
GCGGGCGACG AGGTCGCGCA GGCGCTCGGC CGGGTCTCGG TGGGGACGCC GTTGAACGGC
AGAGTCGAGG TGGCCGGACC CGAGCAGGTC AGGATGGACG AGTTCTTCCG CGACGTGCTG
GCCTCCTGGG GCGATCCGCG CGAGGTGGTC ACCGACCCGC ACGCGCACTA CTTCGGAGCC
GAGCTGCTCG AACGGTCGCT GGTGCCGGAT GACGGCGCCA CCCTCGGCCG GATCCGCTAC
CGCGACTGGT CCGCCCGGAA CGCGGCCGGC AAGTAG
 
Protein sequence
MKIVVIGGTG LIGSKLVTEL GEHGHEAVAA APNTGVNTLT GEGLADVLAG AQVVIDVSNS 
PSFEEKAVLE FFETSTRNLL AAEAAAGVGH HVALSVVGTE RPPGNAYFRA KIAQEQLIEK
SPIPFSLVHA TQFFEFVRRI ADEATDGGKV RMAPVLFQPI AGDEVAQALG RVSVGTPLNG
RVEVAGPEQV RMDEFFRDVL ASWGDPREVV TDPHAHYFGA ELLERSLVPD DGATLGRIRY
RDWSARNAAG K