Gene Sros_5159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5159 
Symbol 
ID8668453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5673282 
End bp5674250 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content74% 
IMG OID 
Productoctaprenyl-diphosphate synthase 
Protein accessionYP_003340680 
Protein GI271966484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0320135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.163759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG CTGCCACTGA TTCCGTACCA CCCGGGTTCG TGTCCGATTT CACCTCCCAG 
GTGACCGACC GGCTCCTCCG CCTGGCCGAT GGCCTGCCGG AACCGGTCCG GGCCCCGGTG
CGTACGCTCG CCGCCGGGCC GGGCAAGTTC GTCCGGCCAC GGCTGCTGGC GGCCGGCGCG
GGCTTCGGCA CGGCCGACCA CGACCGGCTG GTACGCCTGG GCGCCCTGGT GGAACTGATC
CACCTGGCCT CGCTCCTGCA CGACGACGTC ATCGACGAGG CGGAGACCCG CCGGGGAGCG
CCGGCCGCGC ATACGGCCGT CGGCACCGAA CAGGCCATGC TCGCCGGGCT GGCCTGCTTC
GCGCTGGTGG GCACGGAGGC CGCCGACCTC GGAGAGGGCG TCGCCGGGGC CGTGAGCATG
GCTGTCGCCA AGCTCGCCTA CGGTGAGCTG CTCGACGTCG AGCGTGCCTT CGACACCGCC
TTCCCCCTGC CCGCCTACCT GGAGCTGGTG CAGAGCAAGA CCGCCGAGCT GTTCCGGCTC
TGCTGCCTGC TCGGCGCCGC GGAGGCCCGG TCCGGCCACG GAGAGGCGGA CGCGCTCGTC
CGGTTCGGCA CGGCGCTCGG CGTCACGTTC CAGATCCTCG ACGACTGCCT GGACCTGCGC
CCGAACCACT CGGGCAAGCC GGTCGGCACC GACCACGCGC TGGGCCTGTT CGGCGCCCCC
ACCCTGTACG CGCTCCGCGC CGACAGCGGC GGAGAGCTCG CCACGCTGCT GCTGTCGCCG
TCGTTCGGCA CCAGCGACAT GCCCGAGGTG TACTCCCTCG TCGAGGCCCG TGGCGGGCTG
GAGGCCGCGG CACGGCTGGC CGCCGACTGG CACGACCGGG CGCTCGCCGC CCTGGACGAG
CTGCCCGCCG GCGGTCCCCG CGACCGCCTG GCCGCGCTCG CCGCCTCGCT CCTTCAGGCC
CGCTCGTGA
 
Protein sequence
MTTAATDSVP PGFVSDFTSQ VTDRLLRLAD GLPEPVRAPV RTLAAGPGKF VRPRLLAAGA 
GFGTADHDRL VRLGALVELI HLASLLHDDV IDEAETRRGA PAAHTAVGTE QAMLAGLACF
ALVGTEAADL GEGVAGAVSM AVAKLAYGEL LDVERAFDTA FPLPAYLELV QSKTAELFRL
CCLLGAAEAR SGHGEADALV RFGTALGVTF QILDDCLDLR PNHSGKPVGT DHALGLFGAP
TLYALRADSG GELATLLLSP SFGTSDMPEV YSLVEARGGL EAAARLAADW HDRALAALDE
LPAGGPRDRL AALAASLLQA RS