Gene Sros_5135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5135 
Symbol 
ID8668429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5647178 
End bp5648221 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340658 
Protein GI271966462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTG AGCCCCAGCC CACCCTCCAG GATGAATGGT CGGCGTGGGA ACCCTATCCG 
CAGCGGCAAC ACTACTGGCC GGGGCTAGGC GTCGAGCGCG TCGACGAGTA CGAGGTCGAT
CACGCCCGGC TGCAGGCCAT CGGCACGCAC TTCATGACCG AGTTCGAGGG GGTTTACCAG
CGCCTGCCCA AGCCGCAGCT CGACGACTTC GCTGACCGCA TGGGTTACCA CCCGACGGGG
TGGGGGGCCG CGCAGACCTG GACGACTTTG GTCGGCGCCT TCGAGGATGC GTTGTGTTTC
CTGACCACGG ACGCGATGAT GGAGACGGCG GTGGCGGCCA GGGGGGTCGC GACGAGCGGA
CGCACTTACG AACTGGTCGA CAAGGATTCC TGGCTGTCCA AGCACCCAGT CGGGGGTGGG
ATCATCTCGG ATCGAGCCGG CCGCTACCGG GTAACCAACG CGTACCCGTC GGGATCGATC
GGGCTGCTCA CACCCTATGA GAACGTCGAC AACGTGATCG AGAACTGGGT GGCGAACGAG
CCCTGGACGG GCGACGACAG CCGTGCCTAC ATCAGGCACA AGCTCATGAG CTGGAAGCCG
GAGGGGCTGG CCTCTTTCGC GAGCACGGTC ACCGGCATCG CCAACGGGCT GGTCGAGGTC
GCGCACGGGC TGATGTCGCG CGCGCAGGAG ACGAGGGACG CGCCCTGGCG GGGGGCCGCG
GCCGACCACG CCCAGCAGTC GCTCCGGCAG ATTTACGAGA ACGTCCGCGG ACTGGCCGCC
ACCCACGGCC AGGTCGCGCA GGGCCTCACC GCCGCCGCCG AGATCATCAC GACCGCGCAG
AGCCGCTTCG ACGTGGTGGT CAACAAGGGC GGTTGGGAGT TCTCCGATCT GTGGCACGGC
GACGACGAGG ACGCCAGGCA CTTCCTCAAG GGGGTCGGCC AGCAGCTCGC GGACGTGCTA
CGGCAGATGC CGCAGACCGC GCGGATCCAC CTGCCCGGCC TCATCCCCGA GGCCGAGCGG
GCGACCTACT CCCTGGCCGG GTGA
 
Protein sequence
MTREPQPTLQ DEWSAWEPYP QRQHYWPGLG VERVDEYEVD HARLQAIGTH FMTEFEGVYQ 
RLPKPQLDDF ADRMGYHPTG WGAAQTWTTL VGAFEDALCF LTTDAMMETA VAARGVATSG
RTYELVDKDS WLSKHPVGGG IISDRAGRYR VTNAYPSGSI GLLTPYENVD NVIENWVANE
PWTGDDSRAY IRHKLMSWKP EGLASFASTV TGIANGLVEV AHGLMSRAQE TRDAPWRGAA
ADHAQQSLRQ IYENVRGLAA THGQVAQGLT AAAEIITTAQ SRFDVVVNKG GWEFSDLWHG
DDEDARHFLK GVGQQLADVL RQMPQTARIH LPGLIPEAER ATYSLAG