Gene Sros_5131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5131 
Symbol 
ID8668425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5644375 
End bp5645571 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative dehydrogenase 
Protein accessionYP_003340656 
Protein GI271966460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.143413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACC GCATCATCGT CCTCGGAGCC GGATACACCG GAGCCATCGC CGCCGGCCGC 
CTTGCCAAGC GGCTCCGCCG CGAGGACGTC GCCATCACCC TCGTCAACGC CGAGCCCGAC
TTCGTCGAAC GCGTCCGCAT GCACCAGCTG GCGACCGGCC AGGACCTCAA GCCCCGGTCG
TTCGGCGAGA TGTTCGCGGG CACCGGCGTC GAACTGAGGA TCGCGAAGGT CACCGGCGTC
GACGTCGACC GCAGGACCGT CGCCGTGATC GACGCGAACG GTGCCGAAGA ACTCGCCTAC
GACATGCTCG TCTACGCTCT CGGCAGCGGC TGGAACGCCC AAGGCGTCCC CGGGACCGCA
GAGCACGCCT ATGAGATCGC CGGCCGCCCC GGAGCACTCC GGCTGCGCGA GCGCCTGGCC
CGCCTCGACG CCGGGCAGAG CGTGGTCGTC GTCGGCGGCG GCCTCACCGG CCTGGAGGCC
GCGACCGAGA TCGCCGAGGC CCGCCCGGAC CTCGACGTCG CCCTCGCCGC CCGCGGCGGC
CTCGGCGACT GGCTCTCGCC CAAGGGCCGC GGGCACCTGC GGAAGGTCTT CGGCAAGCTC
GGGATCACCG TGCACGAGCA CGCCACCGTC ACCGGCGTCG AAGCCGGCCG CGTCGCCACC
GCCGACGGCA AGGCCATCCC GGCCGCGGTC ACCGTGTGGA CCACCGGCTT CGCGGTTCAC
CCGATCGCGA AGGCGACCAC CCTGGAGGTC GCCGGCACCG GCCAGATCGT GGTCGACGGG
ACCATGCGCT CGGTCTCGCA CCCGGACGTG TACGCCATCG GCGACGCGGC CATGGTGATG
GGTCCCGGAG ACAAGCCGCT GCGGATGTCG TGCGCCTCGG GGACTCCGGC CGCGTGGCAG
GCCGCCGACG CGATCGCGGC GCGCCTGACC GGCGGGAAGG TCCCGAACAC GCCGATCCGC
TACTTCAACC AGTGCATCTC ACTGGGCCGC AAGGAGGGTT TGATCCAGTA CGTCACCGCC
GACGACCGCG CCGTGCAGGC GGTCCTGACC GGACGGCTCG CCGCCGTCTA CAAGGAGCTG
ATCTGCAAGG GTGCCGCCTG GGGCGTCGCC AACCCGACGC TCGGGCTGCC GACCCGGCGC
CGCCGCGTCA CGCGGGAGCG GGCCGCTGTG GGCTCGGCCG GCAAGGCACT GGCATAG
 
Protein sequence
MQHRIIVLGA GYTGAIAAGR LAKRLRREDV AITLVNAEPD FVERVRMHQL ATGQDLKPRS 
FGEMFAGTGV ELRIAKVTGV DVDRRTVAVI DANGAEELAY DMLVYALGSG WNAQGVPGTA
EHAYEIAGRP GALRLRERLA RLDAGQSVVV VGGGLTGLEA ATEIAEARPD LDVALAARGG
LGDWLSPKGR GHLRKVFGKL GITVHEHATV TGVEAGRVAT ADGKAIPAAV TVWTTGFAVH
PIAKATTLEV AGTGQIVVDG TMRSVSHPDV YAIGDAAMVM GPGDKPLRMS CASGTPAAWQ
AADAIAARLT GGKVPNTPIR YFNQCISLGR KEGLIQYVTA DDRAVQAVLT GRLAAVYKEL
ICKGAAWGVA NPTLGLPTRR RRVTRERAAV GSAGKALA