Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5131 |
Symbol | |
ID | 8668425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5644375 |
End bp | 5645571 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | putative dehydrogenase |
Protein accession | YP_003340656 |
Protein GI | 271966460 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.143413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCACC GCATCATCGT CCTCGGAGCC GGATACACCG GAGCCATCGC CGCCGGCCGC CTTGCCAAGC GGCTCCGCCG CGAGGACGTC GCCATCACCC TCGTCAACGC CGAGCCCGAC TTCGTCGAAC GCGTCCGCAT GCACCAGCTG GCGACCGGCC AGGACCTCAA GCCCCGGTCG TTCGGCGAGA TGTTCGCGGG CACCGGCGTC GAACTGAGGA TCGCGAAGGT CACCGGCGTC GACGTCGACC GCAGGACCGT CGCCGTGATC GACGCGAACG GTGCCGAAGA ACTCGCCTAC GACATGCTCG TCTACGCTCT CGGCAGCGGC TGGAACGCCC AAGGCGTCCC CGGGACCGCA GAGCACGCCT ATGAGATCGC CGGCCGCCCC GGAGCACTCC GGCTGCGCGA GCGCCTGGCC CGCCTCGACG CCGGGCAGAG CGTGGTCGTC GTCGGCGGCG GCCTCACCGG CCTGGAGGCC GCGACCGAGA TCGCCGAGGC CCGCCCGGAC CTCGACGTCG CCCTCGCCGC CCGCGGCGGC CTCGGCGACT GGCTCTCGCC CAAGGGCCGC GGGCACCTGC GGAAGGTCTT CGGCAAGCTC GGGATCACCG TGCACGAGCA CGCCACCGTC ACCGGCGTCG AAGCCGGCCG CGTCGCCACC GCCGACGGCA AGGCCATCCC GGCCGCGGTC ACCGTGTGGA CCACCGGCTT CGCGGTTCAC CCGATCGCGA AGGCGACCAC CCTGGAGGTC GCCGGCACCG GCCAGATCGT GGTCGACGGG ACCATGCGCT CGGTCTCGCA CCCGGACGTG TACGCCATCG GCGACGCGGC CATGGTGATG GGTCCCGGAG ACAAGCCGCT GCGGATGTCG TGCGCCTCGG GGACTCCGGC CGCGTGGCAG GCCGCCGACG CGATCGCGGC GCGCCTGACC GGCGGGAAGG TCCCGAACAC GCCGATCCGC TACTTCAACC AGTGCATCTC ACTGGGCCGC AAGGAGGGTT TGATCCAGTA CGTCACCGCC GACGACCGCG CCGTGCAGGC GGTCCTGACC GGACGGCTCG CCGCCGTCTA CAAGGAGCTG ATCTGCAAGG GTGCCGCCTG GGGCGTCGCC AACCCGACGC TCGGGCTGCC GACCCGGCGC CGCCGCGTCA CGCGGGAGCG GGCCGCTGTG GGCTCGGCCG GCAAGGCACT GGCATAG
|
Protein sequence | MQHRIIVLGA GYTGAIAAGR LAKRLRREDV AITLVNAEPD FVERVRMHQL ATGQDLKPRS FGEMFAGTGV ELRIAKVTGV DVDRRTVAVI DANGAEELAY DMLVYALGSG WNAQGVPGTA EHAYEIAGRP GALRLRERLA RLDAGQSVVV VGGGLTGLEA ATEIAEARPD LDVALAARGG LGDWLSPKGR GHLRKVFGKL GITVHEHATV TGVEAGRVAT ADGKAIPAAV TVWTTGFAVH PIAKATTLEV AGTGQIVVDG TMRSVSHPDV YAIGDAAMVM GPGDKPLRMS CASGTPAAWQ AADAIAARLT GGKVPNTPIR YFNQCISLGR KEGLIQYVTA DDRAVQAVLT GRLAAVYKEL ICKGAAWGVA NPTLGLPTRR RRVTRERAAV GSAGKALA
|
| |