| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5131 |
|---|
| Symbol | |
|---|
| ID | 8668425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5644375 |
|---|
| End bp | 5645571 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | putative dehydrogenase |
|---|
| Protein accession | YP_003340656 |
|---|
| Protein GI | 271966460 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.143413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACC GCATCATCGT CCTCGGAGCC GGATACACCG GAGCCATCGC CGCCGGCCGC
CTTGCCAAGC GGCTCCGCCG CGAGGACGTC GCCATCACCC TCGTCAACGC CGAGCCCGAC
TTCGTCGAAC GCGTCCGCAT GCACCAGCTG GCGACCGGCC AGGACCTCAA GCCCCGGTCG
TTCGGCGAGA TGTTCGCGGG CACCGGCGTC GAACTGAGGA TCGCGAAGGT CACCGGCGTC
GACGTCGACC GCAGGACCGT CGCCGTGATC GACGCGAACG GTGCCGAAGA ACTCGCCTAC
GACATGCTCG TCTACGCTCT CGGCAGCGGC TGGAACGCCC AAGGCGTCCC CGGGACCGCA
GAGCACGCCT ATGAGATCGC CGGCCGCCCC GGAGCACTCC GGCTGCGCGA GCGCCTGGCC
CGCCTCGACG CCGGGCAGAG CGTGGTCGTC GTCGGCGGCG GCCTCACCGG CCTGGAGGCC
GCGACCGAGA TCGCCGAGGC CCGCCCGGAC CTCGACGTCG CCCTCGCCGC CCGCGGCGGC
CTCGGCGACT GGCTCTCGCC CAAGGGCCGC GGGCACCTGC GGAAGGTCTT CGGCAAGCTC
GGGATCACCG TGCACGAGCA CGCCACCGTC ACCGGCGTCG AAGCCGGCCG CGTCGCCACC
GCCGACGGCA AGGCCATCCC GGCCGCGGTC ACCGTGTGGA CCACCGGCTT CGCGGTTCAC
CCGATCGCGA AGGCGACCAC CCTGGAGGTC GCCGGCACCG GCCAGATCGT GGTCGACGGG
ACCATGCGCT CGGTCTCGCA CCCGGACGTG TACGCCATCG GCGACGCGGC CATGGTGATG
GGTCCCGGAG ACAAGCCGCT GCGGATGTCG TGCGCCTCGG GGACTCCGGC CGCGTGGCAG
GCCGCCGACG CGATCGCGGC GCGCCTGACC GGCGGGAAGG TCCCGAACAC GCCGATCCGC
TACTTCAACC AGTGCATCTC ACTGGGCCGC AAGGAGGGTT TGATCCAGTA CGTCACCGCC
GACGACCGCG CCGTGCAGGC GGTCCTGACC GGACGGCTCG CCGCCGTCTA CAAGGAGCTG
ATCTGCAAGG GTGCCGCCTG GGGCGTCGCC AACCCGACGC TCGGGCTGCC GACCCGGCGC
CGCCGCGTCA CGCGGGAGCG GGCCGCTGTG GGCTCGGCCG GCAAGGCACT GGCATAG
|
|---|
| Protein sequence | MQHRIIVLGA GYTGAIAAGR LAKRLRREDV AITLVNAEPD FVERVRMHQL ATGQDLKPRS
FGEMFAGTGV ELRIAKVTGV DVDRRTVAVI DANGAEELAY DMLVYALGSG WNAQGVPGTA
EHAYEIAGRP GALRLRERLA RLDAGQSVVV VGGGLTGLEA ATEIAEARPD LDVALAARGG
LGDWLSPKGR GHLRKVFGKL GITVHEHATV TGVEAGRVAT ADGKAIPAAV TVWTTGFAVH
PIAKATTLEV AGTGQIVVDG TMRSVSHPDV YAIGDAAMVM GPGDKPLRMS CASGTPAAWQ
AADAIAARLT GGKVPNTPIR YFNQCISLGR KEGLIQYVTA DDRAVQAVLT GRLAAVYKEL
ICKGAAWGVA NPTLGLPTRR RRVTRERAAV GSAGKALA
|
|---|
| |