Gene Sros_5096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5096 
Symbol 
ID8668390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5611563 
End bp5612432 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content73% 
IMG OID 
Productepimerase PhzC/PhzF 
Protein accessionYP_003340625 
Protein GI271966429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.487089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGT ACGGCCTGCC CGTCGCGATC GTCCACGCGT GCCTGCGCGA CGGCAGGGGC 
GGCAGCCCCA CCGCGGTCAT GGAGGAAGCG CCCCTGACCG ACGACCAGCG CCGCCGCATA
CCGGTCCTGA TGGGAACCTC TCACGCGGTC TTCGGCCACG CTCACCACGG CCGAGCTGAA
GATCCCACGG TTTCCCTGCG CTTCTTCACC GCCGAGGGAG AGCTGCCCGC GTGCGGCCAC
GGGACCCTCG CCGCCCTGGC CTTCCTCGCC GAGCGCTCCG GGGTCGAGGA CTACCGGGCA
ACCCTCCACG CGCCGGGGCG CACCTTCGCC GGCCGGGCCG TACGGGAGGA CAACCGGGTC
AGCGCCGTCT TCGACGCCGG GCCCGTCAGC CTGCGCGAGC CCACCGCGAT CGAGTGCGAC
CTCGTTCTGC GCGCCCTTGG CGTCACCTCC GACACGCTCG CCCCCGGCGC CCGCGTCGCC
GCGATGGGGC GGCCGCGGCT GCTGATCCCC GTCACCACGC GCTCCGCGCT GGCCGCGCTG
GTCCCGGATC TCGCACGGCT CCGCGCCGCC TGCGACCGGC TCGGTCTTCT GGGCTGCTAC
GTCTACTCCA CTCCGACACA CATCGGACAG GCCGCGGCCC GCATGTTCGC CCCATCGATC
GGTGTCGCGG AGGACATCGC CAACGCCAAC AGCACCGCCT GCCTCGCCGT ACACCTGGCT
GGTCAGGGCG TCACCGACCT CACCGTCGAC ATGGGCGACT CCCTCCGCAC CCCTTCCACG
ATCACCACCA CCACCCGGCA CGGCCAGTCG GGCCCGCTGG TCCAGCTGGG CGGCGCCGCG
AAGATCACCC GCATCGTCCG CCTGCCGTAA
 
Protein sequence
MNGYGLPVAI VHACLRDGRG GSPTAVMEEA PLTDDQRRRI PVLMGTSHAV FGHAHHGRAE 
DPTVSLRFFT AEGELPACGH GTLAALAFLA ERSGVEDYRA TLHAPGRTFA GRAVREDNRV
SAVFDAGPVS LREPTAIECD LVLRALGVTS DTLAPGARVA AMGRPRLLIP VTTRSALAAL
VPDLARLRAA CDRLGLLGCY VYSTPTHIGQ AAARMFAPSI GVAEDIANAN STACLAVHLA
GQGVTDLTVD MGDSLRTPST ITTTTRHGQS GPLVQLGGAA KITRIVRLP