Gene Sros_5070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5070 
Symbol 
ID8668364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5592661 
End bp5593332 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340602 
Protein GI271966406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.578311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGA TGATCGACGA ACCGCTGGAA CGACTCCGCG CCGCCGCCCG ACGCACCCGT 
GAACTGGCCC TGAAGCGTGC GGCCACCGGC CTGGGCCACG AGGACGCCGA CGACGACGTC
GGCACGATCG GCACGGACGG CGCCCTCGGG TTCGACCCGT TCCCTCTGCT CGAAGCCCTC
CATCACAGCG GCGTCCGTGC CGTAGTGATC GGGCAGGTCG CCGGCATCAT GCATGGATCC
ACCGAACTGA CCGGCGATCT GGATCTGCTC TGGGACGGCG TCCCGGCCCA CGCCCCAGCC
CTGGCGGCCG CCTTCACCTC AGTCAACGCC CGACTCACCG ACGAAAAGGG CAACCCCGTA
GCAACTCATC CGGATTCCTT TCTCCGCCCC AAGGTGCAGT TCACCTCAGC CGGAGCCGGC
GGCGACTGCT GCACCCCGGA ACTCCCCTGG GGCAACCTTC GAGTCCGGGA GTTCCTCGAC
CGCGCGATCA CCGCAGTCGA TCCGGGCGGC CTGGAAGTTC ACTACGTCTC CCGAAAAGAC
CTGATCCGGA TGCGCCGCGC CATAGGCCGT CCCAAGGACC TCCGGCGAGC AGACGAACTG
GACTCGTCCG CCTCGGAACG CCGAAGCTTA CGGCCCGCCT CCGACTCTGC CGAAGATCGT
CAGAGGGGTT GA
 
Protein sequence
MNQMIDEPLE RLRAAARRTR ELALKRAATG LGHEDADDDV GTIGTDGALG FDPFPLLEAL 
HHSGVRAVVI GQVAGIMHGS TELTGDLDLL WDGVPAHAPA LAAAFTSVNA RLTDEKGNPV
ATHPDSFLRP KVQFTSAGAG GDCCTPELPW GNLRVREFLD RAITAVDPGG LEVHYVSRKD
LIRMRRAIGR PKDLRRADEL DSSASERRSL RPASDSAEDR QRG