| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5046 |
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| Symbol | |
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| ID | 8668340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 5567935 |
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| End bp | 5570397 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_003340579 |
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| Protein GI | 271966383 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0984554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0303559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGC CGCTGCACGG CATCCGCGTC CTCGACTTCG GCCAGTACGT CGCCGGCCCG
GCCGTGGCCC TGCTCCTCGC CGACCTGGGC GCCGAAGTGA TCCGCATCGA CCCGCCCGGC
GGTCCGCGGT GGGCCTCCCC CGCGGCCGCC GCGCTCAACG CGGGCAAGAA GAGCATCGTG
CTGGACCTGA CCGAGCCCGC CGACGTCACG ACCGCCCGCC GGCTGGTGGC CGGCGCCGAC
GTGGTGGTCG AGAACTTCCG GCCCGGTGTC ATGGCCCGGT TCGGGCTCGG ACCGGAGGAC
ACGCTCGCGC TCAACCCCCG GGTGATCCAC CTGTCGCTGC CCGGCTTCGC CGCGGCCGAC
CCGCGCCGCG ACCTACCGGC CTGGGAGGGG ATCGTGCTGG CGGCCACCGG CGGCTTCACG
GACATGGGAC TGAACCGGAT CCTCATGGGC GTCAACCCGT CCTACACGCC GCTGCCGCTG
GCCTCGGCCT ACGCCGCCGC GCTCGGCGCG CTCGCGGTCG GCGTCGGGCT GGTCGCCAGG
CGGCGCACCG GCCGCGGCGA CGCGTTCGAG GTGCCGCTCG CCGAGGCCGT GCTGGAAGGG
CTGGCGTTCA ACTCGCTGGC CGTCTCCGAC CTCCCCCCGC GCTACCTCTC GCTGCGCGAG
CACGAGATCG CCCGCCGCCG TGCCGCCGGG GAGCCGATGG ACCTCACCTA CGCGCAGCTG
CAGGAGCTCC TCGATCCGTT CTACCGCAGC TACCGCTGCC AGGACGGCAG GCTGTTCTAC
CACTGCTGCC CGGCTCACCG CACCCACGCG ATCCGGTCGC TGCAGCTGCT CGGCATCTGG
GACACCGTCC GCGCGGAGGG CATCCCGGTG GTCGACCCCT ACCTGTCCAC CGACCGCCGG
CCCGACGGCG CGGACTGCAC GCTGCTGGCC TACCCGCTCT CCGCCCGCTG GGCGGCGCGG
CTGTCGGAGC TGATCGCGGC CGCCTTCCGG CGGCACCCGG CGCTGGAGTG GGAACGGCGC
TTCGACGCGG CGGGCATCCC GGGGGCCGCC CACCGCAGCA GTCTGGAGTG GCTGCGTTCG
GAGCATCCGC GCGCGGCGGG GCTCGTCGCC ACCGTCGACG ATCCGGTCCA CGGCGAACTG
ACCGTTCCCG GGCCCGTCGT CTGGACCGAA GGCACCCCGC CCGGCCGCCG GCCCGCCCCC
GCGCTCGACG CCGACCGGGC CGCGATCCTC GCCGACCTGC CGGCGGGGCC GCCGGCACCG
CCGCCCGACC CACCGGCCGC GCCAGGCGGG CTCCCGCTGG CCGGCATCCG CATCCTCGAC
GTCACCAACG TCATCGCCGG GCCGATGATC GCCGCGACCC TCGCACGGTT CGGCGCCGAG
GTCGTCAAGA TCGATCCACC GACGCCGGGC TTCGACCCGT ACCACGCCGT GGTCATCGGC
ATGCACGCCC AGCGCGGCAA GCGCAGCGTG CTGGCCGACC TGCGCACTCC GGCCGGTCGT
GAGGTGCTCG ACCGGCTGCT GCCCACCGTC GACGTCGTCA CGTTCAACGG CAGCGAGCGC
CAGCTCGGCG AGCTCGGCCT GGACCCGCAG CGGCTGCGGG ACATCCGGCC GGGGATCGTG
CTCGTGCGGG TGGACGCCTA TGGCGGGCCG GGTCACGGGC CGCGCAGCCA CGCGGCGGGC
TACGACGACA ACGTGCAGGC GTGCACCGGG ATCATGACCC GGTTCGGCGG CGGCCCGGAC
ACCCCGGAGG AGCACGCGCA CCTCGGGACG ATCGACGCCC TCGCCGGGTT CTGCGGCGCC
TTCGCCGTCG TCGCCGCGCT GGCCGGACGC GGCGAACACG CCCCGGTGAT GCGCACCTCC
CTCGCCGCCG CCGGGCAGCT GCTGCAGATC CCGTTCCTCT TCGACGGCGC GGGCCGCGAC
GACGTGCCGG AACCGGCCGG GCCGGACGTG CTCGGCGAGC ACGCGGGATA CCGGTGCTAT
CCGGCCGCGG ACGGCTGGTT CTTCCTCGCG GGCCCGGCCG AGGTGGTGGC GACCGTGCTC
GGTCTCGACA CGGCCGCGCC GCAGGACCTG CTCGCCGCGC GGTTCCGGGA ACGCCCGGTC
GAGGCGTGGG CCGAGCTGCT CGGCCCGCAC GGGGTCGCGG TGCAACGGAT CGAGCACATC
GCCGCCCTGC GCTCCCGCGG GCTGGTACGG GAGAGCGCCG GGCCCGTCCC GCTGCGCGGC
TCGGCGGTGT TCGTCCGCCA TGACCTGCAC CCCAGCGGCC GGGAGACGGA CCTCATCGCC
CCACAGGCCG TCCGGCCCCG GCACGCGGCG GTGCGGATGC CGTCCGACGC CCCGCGCTAC
GGCGCGCACA CCCGCCAGGT GCTCGCCGAG CTCGGCTTCA CACCCACCGA GATCGAAACG
ATGGCCGCCG ACGGCGCGAT CGCCGACGGC TGGACCGCCG ACCACACCTA CCTGCCCACC
TGA
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| Protein sequence | MSSPLHGIRV LDFGQYVAGP AVALLLADLG AEVIRIDPPG GPRWASPAAA ALNAGKKSIV
LDLTEPADVT TARRLVAGAD VVVENFRPGV MARFGLGPED TLALNPRVIH LSLPGFAAAD
PRRDLPAWEG IVLAATGGFT DMGLNRILMG VNPSYTPLPL ASAYAAALGA LAVGVGLVAR
RRTGRGDAFE VPLAEAVLEG LAFNSLAVSD LPPRYLSLRE HEIARRRAAG EPMDLTYAQL
QELLDPFYRS YRCQDGRLFY HCCPAHRTHA IRSLQLLGIW DTVRAEGIPV VDPYLSTDRR
PDGADCTLLA YPLSARWAAR LSELIAAAFR RHPALEWERR FDAAGIPGAA HRSSLEWLRS
EHPRAAGLVA TVDDPVHGEL TVPGPVVWTE GTPPGRRPAP ALDADRAAIL ADLPAGPPAP
PPDPPAAPGG LPLAGIRILD VTNVIAGPMI AATLARFGAE VVKIDPPTPG FDPYHAVVIG
MHAQRGKRSV LADLRTPAGR EVLDRLLPTV DVVTFNGSER QLGELGLDPQ RLRDIRPGIV
LVRVDAYGGP GHGPRSHAAG YDDNVQACTG IMTRFGGGPD TPEEHAHLGT IDALAGFCGA
FAVVAALAGR GEHAPVMRTS LAAAGQLLQI PFLFDGAGRD DVPEPAGPDV LGEHAGYRCY
PAADGWFFLA GPAEVVATVL GLDTAAPQDL LAARFRERPV EAWAELLGPH GVAVQRIEHI
AALRSRGLVR ESAGPVPLRG SAVFVRHDLH PSGRETDLIA PQAVRPRHAA VRMPSDAPRY
GAHTRQVLAE LGFTPTEIET MAADGAIADG WTADHTYLPT
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