Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5026 |
Symbol | |
ID | 8668320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5551344 |
End bp | 5551889 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003340563 |
Protein GI | 271966367 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00941877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00915843 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCTGAGA CGACGACCTG GCCGGACGAG GCGCTGATCG CGGCGGCCCG GGACGGCGAT GCCGAGTCGA TCGCCGCCCT GGTGTCGGGT GCGCACCCGC ACGTACGGCA CTTCGCCCGC CACCTGTGCG CCACGCCGGA GGAGGCCGAG GACGCGGCGC AGGAGGCGTT GATCGTCCTC TGTCGCAAGA TCGGCACGCT GCGCGCCACC GGCGCCCTGG TGCCGTGGAT GTTCCGGATC ATCCGCAACG AATGCGTACG CCAGGCCAGG CTGGCACTGC GGCCACCGCC TCCCCTCCAC GGCGCCGCCG TACGGTCTGC GGAGGACGAG ATGTTCCAGC GGCTGGAGGC GGCCCGGGTG GCGGAAGCCA TCGCGGCGCT GCCCGCCGAC CAGCGGCAGG TGCTGATCAT GCGGGACGTC CAGGGCCTCG GCGGCCGGAC GGCCGCCGAC GCGCTGGGCC TGACCGTGGC GGCGACGAAG TCCCGCCTGT ACCGCGCCCG CGCGGCTGTG CAGGACCGGC TGGGCGAGGG GGCGCGCGAT GTCTGA
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Protein sequence | MAETTTWPDE ALIAAARDGD AESIAALVSG AHPHVRHFAR HLCATPEEAE DAAQEALIVL CRKIGTLRAT GALVPWMFRI IRNECVRQAR LALRPPPPLH GAAVRSAEDE MFQRLEAARV AEAIAALPAD QRQVLIMRDV QGLGGRTAAD ALGLTVAATK SRLYRARAAV QDRLGEGARD V
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