Gene Sros_5026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5026 
Symbol 
ID8668320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5551344 
End bp5551889 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content75% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340563 
Protein GI271966367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00941877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00915843 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCTGAGA CGACGACCTG GCCGGACGAG GCGCTGATCG CGGCGGCCCG GGACGGCGAT 
GCCGAGTCGA TCGCCGCCCT GGTGTCGGGT GCGCACCCGC ACGTACGGCA CTTCGCCCGC
CACCTGTGCG CCACGCCGGA GGAGGCCGAG GACGCGGCGC AGGAGGCGTT GATCGTCCTC
TGTCGCAAGA TCGGCACGCT GCGCGCCACC GGCGCCCTGG TGCCGTGGAT GTTCCGGATC
ATCCGCAACG AATGCGTACG CCAGGCCAGG CTGGCACTGC GGCCACCGCC TCCCCTCCAC
GGCGCCGCCG TACGGTCTGC GGAGGACGAG ATGTTCCAGC GGCTGGAGGC GGCCCGGGTG
GCGGAAGCCA TCGCGGCGCT GCCCGCCGAC CAGCGGCAGG TGCTGATCAT GCGGGACGTC
CAGGGCCTCG GCGGCCGGAC GGCCGCCGAC GCGCTGGGCC TGACCGTGGC GGCGACGAAG
TCCCGCCTGT ACCGCGCCCG CGCGGCTGTG CAGGACCGGC TGGGCGAGGG GGCGCGCGAT
GTCTGA
 
Protein sequence
MAETTTWPDE ALIAAARDGD AESIAALVSG AHPHVRHFAR HLCATPEEAE DAAQEALIVL 
CRKIGTLRAT GALVPWMFRI IRNECVRQAR LALRPPPPLH GAAVRSAEDE MFQRLEAARV
AEAIAALPAD QRQVLIMRDV QGLGGRTAAD ALGLTVAATK SRLYRARAAV QDRLGEGARD
V