Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5022 |
Symbol | |
ID | 8668316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5548723 |
End bp | 5549337 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340560 |
Protein GI | 271966364 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00332946 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0559507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACGCCA AGCAGTACGA GATCACCCTG CCTGCCGGCT ACGACATGAG GATCATCCGC AAACGGGTAG CCGATGGCGG CCACGTCCTC GACGACCGCG CCGGCCTGGG CCTGAAGGCG TATGCCATCC GCGAACGCGG CGTCGACGGC TCGCCGGTCA ACCAGTACGC CCCCTTCTAC CTGTGGAACG ACACCGGCTC GATGGCCCGC TTCCTCGTCG GAAGTGGCGG ATTCCAGAAC ATCATCCGGG ACTTCGGTCG CCCTGCCGCC CGCCACTGGA CAGGCATCGC CTGCCACGCC GGCCCCGCCC GCACGGCTCC TCCCAGGGCG GCCTCGCGCC GCCTCACCCC GATACCTTCC GACGCGGATC CGGACGGCAC TGGACTGGGC CTGTCCGCGC TGCTCGCGCG GGAGGCCGAA CAGCTGCAAC AGCTCTCCCG CCATGACGGC GTGCACACCG CCGCGCTGGC CGTCGACCCC CACCACTGGC AGCTGCTGCG GTTCGTGTTG TGGGCGGACA CGTCCGCGCC GGACGAGGAC GCGACCGAGC GCTACGAGGT ACTGCACCTG TCCGCCCCGG GCCTGGGCGA CCTGCCGGAG GGACAGAACT GGTAG
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Protein sequence | MYAKQYEITL PAGYDMRIIR KRVADGGHVL DDRAGLGLKA YAIRERGVDG SPVNQYAPFY LWNDTGSMAR FLVGSGGFQN IIRDFGRPAA RHWTGIACHA GPARTAPPRA ASRRLTPIPS DADPDGTGLG LSALLAREAE QLQQLSRHDG VHTAALAVDP HHWQLLRFVL WADTSAPDED ATERYEVLHL SAPGLGDLPE GQNW
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