Gene Sros_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4960 
Symbol 
ID8668254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5484151 
End bp5484831 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340505 
Protein GI271966309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0619333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.992711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACGC CGGTTTCGCG GAGAGTGCGC GATCTTGTCT ATGAGACGTT CGCGTCGGAG 
GGACGCGCAC CGTCAGTGGC CGAGCTGGCG CGCAGAACGC AGAGCACTGT CGATGCGATC
CAGAAGGTCT TGAACGACCT GGCGGAGGCC CATGCCCTGG TCCTGACGCC CGACGGGGAC
GCGGTGCGGA TGGCCCACCC GTTCACCTCT GCGCCGATGG CGTTCGTCGT GACACCGCTG
GACGGGCATG ACGACCGCCG CTGGTGGGGC GGATGCGCGT GGGACTCCTT CGGCATCAGC
GCCGCCCTCC ACCTGGACGT CCGCATCGAC ACGGCATGTC CGCAGTGCGG AGCCCCGATC
AGCTTCCAGA CGGGCCCGCA GCTCCCGCCC CCGGCGGGTC TCGCGGTCCG GTTTCCCCGG
CCTGCCGAGG AGTGGTGGGC CGATGTGGTC GGCACCTGCA CGATGATCCG CGCGTTCTGC
GACCGCGCTC ACGCCGAGCA GTGGACGACC GACAACGTAC CGGGCACCGG CTACATCGCC
GAGGCGACGG CCGTATGGCG ACTGGCCGGC CCGTGGTACG GCGATCGCCT GGACCCCGAG
TTCCAACCGC ACAGCCGGGA GCACAACCAG GGGCTCCTCG ATGAATGCGG CCTCACAGGC
CCGTTCTGGC AGCTGCCGTA G
 
Protein sequence
MKTPVSRRVR DLVYETFASE GRAPSVAELA RRTQSTVDAI QKVLNDLAEA HALVLTPDGD 
AVRMAHPFTS APMAFVVTPL DGHDDRRWWG GCAWDSFGIS AALHLDVRID TACPQCGAPI
SFQTGPQLPP PAGLAVRFPR PAEEWWADVV GTCTMIRAFC DRAHAEQWTT DNVPGTGYIA
EATAVWRLAG PWYGDRLDPE FQPHSREHNQ GLLDECGLTG PFWQLP