Gene Sros_4937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4937 
Symbol 
ID8668231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5464416 
End bp5466116 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003340488 
Protein GI271966292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCTCA CCCCGAATCC CGAAACCATG TCCCTGCCCG TCGAGGCGGG CGACAGCGCA 
CACGTCCGCG CCACGAGCGT CACCGTCACC CGCGGGTCCC GGCGCATCCT GAACGACGTC
TCGATCACTG TCTCCGCCCG GTCGCGGGTC GCCGTCGTCG GCGAGAACGG CCGTGGCAAG
ACGACGCTGC TGCACGTCCT CGCCGGACTG ATCGCGCCAG ACGAAGGCAC CGTGCACCGG
GCCGGCACGA TCGGCCTGGC CCGCCAGGAG CTGTCCGCGC GAGACGGTGA GACCGTCGCC
ACCCTGACGT CCGAGGCACT GGCCGCGTCG CTCGCGGCCC TCGGCGCGCT GGAGGAGGCG
ACCCTCGCCA TGACCGAGGG CGATCCCACT GCCGACGACC GCTACGCCGC CGCACTCGAC
GCCGCCACCC GGCTCGACGC GTGGGATGCC GAACGCCGTA TCGACGTCGC CCTCGAGGCC
CTCGGCGCTT GCACCGACCG CGACCGTCCA TTGGTGATGC TGTCGGTCGG CCAGCGCTAC
CGGGTGCGGC TGGCGTGCCT GCTCGGCGCG CGGCACGACG TGCTGCTGCT CGACGAGCCG
ACCAACCACC TCGACGCCGG CGGGCTGGAC TTCCTGACCC GCAGGCTGCG TGAGCACGAT
GGCGGCCTCG CCGTCGTCAG CCACGACCGG GCGCTGCTGC GCGACGTCGC GGACCGGTTC
CTCGACCTCG ACCCGGCCCG CGACGGGAAG CCGCGGCTGT ACGCCGGCGG CTATGACGCC
TGGCAGGACG CCCGGCGTCG CGAGCGTGAG CGCTGGGAGC AGGACCACGA GCAGCAGCAG
GCCGAGCACC GGCGGCTGCA GGAGGCGGTG TCGAAGGCCC GCGACCGGCT CTCCACCGGC
TGGCGGCCGG ACAAGGGAAC TGGCAAGCAC CAGCGCCAGT CCCGCGCACC AGGCGTCGTG
CAGGCCCTGA ACCGCCAGCA GGACGCCCTG CGGGCGCACC GGATCGACGT GCCGGAGCCG
CCGCCGGCGT TACGGTGGCC GAACCTGGGC GTCCGGCCGG GAGCGCCGCA GTTGCGTGCG
CATGGCGTCA CCGTCGACGG GCGGCTGGCC GGTCCGGTCG ACCTCACCCT CGACGGGGGC
GACCGGCTGC TCATCACCGG ACCGAACGGT GCTGGAAAGT CCACGCTGCT CGCGGTGCTG
GCCGGTTCGC TCGAGCCCAC CGACGGGCAC GTCCGGACGG CGCAGGGGGC ACGGATCGCC
CGGGTCACCC AGGAGACCGC CAAGCAGGAG CCCGGACTCA CCGCCCGCGA GGTGTACGCC
CGCCATGTGG GACGGCTGGT GGCCCGCGAG GCACTGCGCG ACGCCGACGC CGTCCCTCTC
GGGGCGCTCG GACTGCTGGA CTCCGATGCG ATGCGCACGC CGGTCGGGCG GATGTCGCAG
GGACAGCAGC GGCGCCTCGA CTTGGCGCTC GCGCTGGCCG GTCGGCCCGG GCTGATCCTG
CTCGACGAGC CGACCAATCA CCTGTCGTCG GCGCTGGTCG ACGAGCTGAC CGATGCGATC
CGCGACACGA GCGCCGCCGT CGTCGTCGCC ACGCACGACC GGCAACTGCT GCGAGACCTC
GCCGACTGGC CGCGTCTGGA GATAGGTGAA TCTCCAGCAC CGGCTGTCCG ACCCTGCGCG
ACCCGTTCGT CAGATGAGTG A
 
Protein sequence
MNLTPNPETM SLPVEAGDSA HVRATSVTVT RGSRRILNDV SITVSARSRV AVVGENGRGK 
TTLLHVLAGL IAPDEGTVHR AGTIGLARQE LSARDGETVA TLTSEALAAS LAALGALEEA
TLAMTEGDPT ADDRYAAALD AATRLDAWDA ERRIDVALEA LGACTDRDRP LVMLSVGQRY
RVRLACLLGA RHDVLLLDEP TNHLDAGGLD FLTRRLREHD GGLAVVSHDR ALLRDVADRF
LDLDPARDGK PRLYAGGYDA WQDARRRERE RWEQDHEQQQ AEHRRLQEAV SKARDRLSTG
WRPDKGTGKH QRQSRAPGVV QALNRQQDAL RAHRIDVPEP PPALRWPNLG VRPGAPQLRA
HGVTVDGRLA GPVDLTLDGG DRLLITGPNG AGKSTLLAVL AGSLEPTDGH VRTAQGARIA
RVTQETAKQE PGLTAREVYA RHVGRLVARE ALRDADAVPL GALGLLDSDA MRTPVGRMSQ
GQQRRLDLAL ALAGRPGLIL LDEPTNHLSS ALVDELTDAI RDTSAAVVVA THDRQLLRDL
ADWPRLEIGE SPAPAVRPCA TRSSDE