Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4937 |
Symbol | |
ID | 8668231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5464416 |
End bp | 5466116 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003340488 |
Protein GI | 271966292 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCTCA CCCCGAATCC CGAAACCATG TCCCTGCCCG TCGAGGCGGG CGACAGCGCA CACGTCCGCG CCACGAGCGT CACCGTCACC CGCGGGTCCC GGCGCATCCT GAACGACGTC TCGATCACTG TCTCCGCCCG GTCGCGGGTC GCCGTCGTCG GCGAGAACGG CCGTGGCAAG ACGACGCTGC TGCACGTCCT CGCCGGACTG ATCGCGCCAG ACGAAGGCAC CGTGCACCGG GCCGGCACGA TCGGCCTGGC CCGCCAGGAG CTGTCCGCGC GAGACGGTGA GACCGTCGCC ACCCTGACGT CCGAGGCACT GGCCGCGTCG CTCGCGGCCC TCGGCGCGCT GGAGGAGGCG ACCCTCGCCA TGACCGAGGG CGATCCCACT GCCGACGACC GCTACGCCGC CGCACTCGAC GCCGCCACCC GGCTCGACGC GTGGGATGCC GAACGCCGTA TCGACGTCGC CCTCGAGGCC CTCGGCGCTT GCACCGACCG CGACCGTCCA TTGGTGATGC TGTCGGTCGG CCAGCGCTAC CGGGTGCGGC TGGCGTGCCT GCTCGGCGCG CGGCACGACG TGCTGCTGCT CGACGAGCCG ACCAACCACC TCGACGCCGG CGGGCTGGAC TTCCTGACCC GCAGGCTGCG TGAGCACGAT GGCGGCCTCG CCGTCGTCAG CCACGACCGG GCGCTGCTGC GCGACGTCGC GGACCGGTTC CTCGACCTCG ACCCGGCCCG CGACGGGAAG CCGCGGCTGT ACGCCGGCGG CTATGACGCC TGGCAGGACG CCCGGCGTCG CGAGCGTGAG CGCTGGGAGC AGGACCACGA GCAGCAGCAG GCCGAGCACC GGCGGCTGCA GGAGGCGGTG TCGAAGGCCC GCGACCGGCT CTCCACCGGC TGGCGGCCGG ACAAGGGAAC TGGCAAGCAC CAGCGCCAGT CCCGCGCACC AGGCGTCGTG CAGGCCCTGA ACCGCCAGCA GGACGCCCTG CGGGCGCACC GGATCGACGT GCCGGAGCCG CCGCCGGCGT TACGGTGGCC GAACCTGGGC GTCCGGCCGG GAGCGCCGCA GTTGCGTGCG CATGGCGTCA CCGTCGACGG GCGGCTGGCC GGTCCGGTCG ACCTCACCCT CGACGGGGGC GACCGGCTGC TCATCACCGG ACCGAACGGT GCTGGAAAGT CCACGCTGCT CGCGGTGCTG GCCGGTTCGC TCGAGCCCAC CGACGGGCAC GTCCGGACGG CGCAGGGGGC ACGGATCGCC CGGGTCACCC AGGAGACCGC CAAGCAGGAG CCCGGACTCA CCGCCCGCGA GGTGTACGCC CGCCATGTGG GACGGCTGGT GGCCCGCGAG GCACTGCGCG ACGCCGACGC CGTCCCTCTC GGGGCGCTCG GACTGCTGGA CTCCGATGCG ATGCGCACGC CGGTCGGGCG GATGTCGCAG GGACAGCAGC GGCGCCTCGA CTTGGCGCTC GCGCTGGCCG GTCGGCCCGG GCTGATCCTG CTCGACGAGC CGACCAATCA CCTGTCGTCG GCGCTGGTCG ACGAGCTGAC CGATGCGATC CGCGACACGA GCGCCGCCGT CGTCGTCGCC ACGCACGACC GGCAACTGCT GCGAGACCTC GCCGACTGGC CGCGTCTGGA GATAGGTGAA TCTCCAGCAC CGGCTGTCCG ACCCTGCGCG ACCCGTTCGT CAGATGAGTG A
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Protein sequence | MNLTPNPETM SLPVEAGDSA HVRATSVTVT RGSRRILNDV SITVSARSRV AVVGENGRGK TTLLHVLAGL IAPDEGTVHR AGTIGLARQE LSARDGETVA TLTSEALAAS LAALGALEEA TLAMTEGDPT ADDRYAAALD AATRLDAWDA ERRIDVALEA LGACTDRDRP LVMLSVGQRY RVRLACLLGA RHDVLLLDEP TNHLDAGGLD FLTRRLREHD GGLAVVSHDR ALLRDVADRF LDLDPARDGK PRLYAGGYDA WQDARRRERE RWEQDHEQQQ AEHRRLQEAV SKARDRLSTG WRPDKGTGKH QRQSRAPGVV QALNRQQDAL RAHRIDVPEP PPALRWPNLG VRPGAPQLRA HGVTVDGRLA GPVDLTLDGG DRLLITGPNG AGKSTLLAVL AGSLEPTDGH VRTAQGARIA RVTQETAKQE PGLTAREVYA RHVGRLVARE ALRDADAVPL GALGLLDSDA MRTPVGRMSQ GQQRRLDLAL ALAGRPGLIL LDEPTNHLSS ALVDELTDAI RDTSAAVVVA THDRQLLRDL ADWPRLEIGE SPAPAVRPCA TRSSDE
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