Gene Sros_4884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4884 
Symbol 
ID8668178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5408270 
End bp5409127 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340444 
Protein GI271966248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.205762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0606988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACT TCACCCGTCG GCAGGCGTTG CGGGCAGGGA CGCTCGGCCT CATGTCGGCC 
GGATTCCTGT CCTGGACCAC CGAGGCCGAC GCCGCCTCCA CCATCGAGAC GATCTACAAG
GCGGCGGGTC CGTGGCCGGT CGCCACCGGC ACCTCGGGCG GCCACCGGCT CTACCACCCG
CAGGCCCTGG GCTCGGGCGG CGTCACCCAC CCGATCGTCA CATGGGGCAA CGGCTCGTGG
GCCACCCCCG ACAACTACCC GGGCCTGCTC AACCACCTCG CCTCATGGGG CTTCGCGGTG
GTCGCCTCCA CCGACACGAC CACGGGCACG GGCGCCGAGA TCCTCGCCGC CGCCCAGCAC
CTCATCAGCC TCAACACCGA CCCCACCAGC GTCTTCCACG GCAAGCTGAA CACCGCCCAG
GTCGCCGCCG TCGGCCACTC CCAGGGCGCG GGCGGATCCA TCAACGCGGC CAACGACTCC
GCCGGGCTGA TCAAGACCGT CGTGCCGATC GCCGTGCCCG CGCAGTGGAT GGCCGGCCCG
GGAGACGAGT TCTCCGTCGC CGACCTGACC TGCCCGGTGC TCTTCCTCAG CGGCGCGAAC
GACTGGCTGA TCTCCTCGGC CGCGACCGTG CAGGGCTACT ACGACCAGGC CACCGCCGGA
GCGGGCCGGG CGCTGCTCAA GGGCGCGGGG CACAACGACA TCCAGAACAC CGGCGGGGCC
TTCCTCGGCT ACGTGACCGC CTGGCTGAGG TACCGCCTCC AGGCCGACGC CCAGGCCCGC
GGGGCGTTCG CCGGCGGCGC CGCCGAGCTC CCCACCAACA CCGCCTGGCA GAACCAGGCC
CTCAAGAACC TCACCTAG
 
Protein sequence
MENFTRRQAL RAGTLGLMSA GFLSWTTEAD AASTIETIYK AAGPWPVATG TSGGHRLYHP 
QALGSGGVTH PIVTWGNGSW ATPDNYPGLL NHLASWGFAV VASTDTTTGT GAEILAAAQH
LISLNTDPTS VFHGKLNTAQ VAAVGHSQGA GGSINAANDS AGLIKTVVPI AVPAQWMAGP
GDEFSVADLT CPVLFLSGAN DWLISSAATV QGYYDQATAG AGRALLKGAG HNDIQNTGGA
FLGYVTAWLR YRLQADAQAR GAFAGGAAEL PTNTAWQNQA LKNLT