Gene Sros_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4880 
Symbol 
ID8668174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5404015 
End bp5405325 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340440 
Protein GI271966244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.556071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0123337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGG ACACCGCGCG GATGATGGAG TGGATCGAGA CGGTCACCTC GCGGGGCATC 
AGGCGTCCCG GCTACCCGGC CGACGACTGG ACCGCCGCGT GGGCCGCCGA GCGCTTCACC
GAGTTCGGGC TCCACGACGT ACGGCTGGCG CCGGTCGAGC TGCCCGTCTG GCGGCCGGTG
ACGGCGGCCC TGGTGGTGCG CCTGGACGCC GACCCGTCGA GAGTCGTGCG GGTGGCGGCG
TCCGCCCTGC CGTACACCAC GCCGAAGGCG ATCGTGAGCG CGCCGGTCAG CCGCGAGGTC
GTGCCGGGCG CGATCGTCGT GCCCGAGTAC ACCTTCACCG AGCTGCCGCA GTCCTACCTC
AGGGACCTGG CGACGGCCGT GCACGACCCC GAGGGCGTCT TCGACGAGCT GGTCCAGACG
CTGCCCTTCC AGCTCGACTA CCTCGACGTC ATCCAGGGCG TCATGGACGG CGGCGCCGCC
GCCTTCGCGG GGGCACTGAC CGGGGTGCCG TGGGAGACAC GCGACTACTA CGTGCCCTAC
GACGCCGTGC ACCGCGGCCT CCCGGCCGTC TGGCTGTCGG GCGGCGACTC GCGGCGGGTG
CTCGACCTGG TCGACGAGGG CCCCTGCACG GGCACGCTCA CCGTCGAGTC GGAGACGGGC
CCGGCCGTCT CGCACAACGT GATCGGCACG CTCCCCGGCC GCTCCGACCA GTGGGTGATC
ATCGGCTCGC ACCACGACGC GCCCTGGGCC TCGGCCGTCG AGGACGCCTC GGGGATCGCG
CTGGTGCTGG CCGCCGCCCA GTACTGGGCG GGCGTGCCCG AGCGGGACCG GCCGCACAAC
CTGATCTTCC TGCTGACCGC AGGTCACATG GCGCACGCCG CGGGCACCCG GGCCTTCATC
GAGGAGAACC GCGGCCTGCT GGGCGACGTC GTGCTCCAGC TCCACCTGGA GCACGCCGCC
CGGCGGTGCG TGATCGTGGA CGACGAGCTG GTGCCCACCG GCGACCCCGA ACCCGGCTGG
TGGTTCACCA CCAGGAAACC GGAGCTGGAG AGGCTGGTGG CGGCGGCCCT CGTCGCGGAG
GACCTGAGAC GCTCGTTCGT GCTGCCGCCG GACGTGTTCT CCCCGATGCC GCCCACCGAC
GGGGCCTTCT TCCACCCCGA AGGGGTGCCG CTCGTGCACT TCCTGTCGGC TCCCATGTAC
CTGTTCGACT CGGCCGACAC CCTCGACAAG GTGCACGAGG CCAGCCTTGA GCCGCTCACC
CGGGCGGCGA TCAGAATCGT CGAAGGGACG GCCGGATGGC GCCGCGCATG A
 
Protein sequence
MIPDTARMME WIETVTSRGI RRPGYPADDW TAAWAAERFT EFGLHDVRLA PVELPVWRPV 
TAALVVRLDA DPSRVVRVAA SALPYTTPKA IVSAPVSREV VPGAIVVPEY TFTELPQSYL
RDLATAVHDP EGVFDELVQT LPFQLDYLDV IQGVMDGGAA AFAGALTGVP WETRDYYVPY
DAVHRGLPAV WLSGGDSRRV LDLVDEGPCT GTLTVESETG PAVSHNVIGT LPGRSDQWVI
IGSHHDAPWA SAVEDASGIA LVLAAAQYWA GVPERDRPHN LIFLLTAGHM AHAAGTRAFI
EENRGLLGDV VLQLHLEHAA RRCVIVDDEL VPTGDPEPGW WFTTRKPELE RLVAAALVAE
DLRRSFVLPP DVFSPMPPTD GAFFHPEGVP LVHFLSAPMY LFDSADTLDK VHEASLEPLT
RAAIRIVEGT AGWRRA