Gene Sros_4771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4771 
Symbol 
ID8668065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5296174 
End bp5297553 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340346 
Protein GI271966150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.186259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA CCAGCGCTCG GAGCCGGTGG ACGTGGATCG CCGGCGCCTC CATCGCCGTC 
CTGACGGCCA CGGTGCTCCT CGGTCCCACG ATGCGTCCGA GCACGGCGAC CAGCCACTGG
GACGCCCCCG CCACCACCCT CAACAAGCAG ATCGACGCCA CCGACCTGTA CGCCTTCACC
AGCCCGGAAC GGCAGGACAC GGTCACGATC GTGGCCAACT ACATCCCTTT CCAGGCGCCG
CACAAGCCGT ACCAGTTCGA CACCGACGCC CGCTATGAGG TGCACATCGA CAACACCGGC
ACCGGCAAGG CCGCCGTCAC CTACCGATGG ACCTTCGCCA ACAAGGGCCT GCCAGTGCCC
TCCTTCGTCC GCAAGCGCGA GCACAAGGCC GGCCCGCTGG ACTCTCTGGT CGAGCAAAGC
TACACGCTGA CCAGGCTGCG CGACGGCAAG TCGGAGACCC TGGTCCGCAA CGGGTACGCC
GCCCCCACCG ACATGGGCGC CCTGGCCACT CCCAACTACC CGGCACTGCG CCACAAGGCC
GTCGTCGACC TGCCCGGTGG GGGCAAGGTG TTCACCGGCA CCGCCGCCGA CCCGTTCTAC
TCCGACAACC ACGCCGTCAA CCTGCTCAGG TTCGGGCTCC CGTTCTTCCC GGTCAAGACC
GGCGTACCGC TGAACGTCAG CTCCCTGGCC CTGCAACTTC CCAAGTCGGA GCTGGCGCTC
GGCGGCGACC CGGCCCGCAA CCCGGTCATC GGCGTCTGGA CCACCGCCTC CCGCAAGTCG
AGCGGCCTGC TCGGCTCCGG CTCGGCCGAC TACAAGCAGG TCTCCCGGCT GGGCAACCCC
AACTTCAACG AAGTGATCAT CCCGCTCAAG CAGCGCGACC ACTTCAACAC CCTGCGACCG
GACGGGGACG AGAGCGGCAA CCTCGTCGTA CCGGCCACGC TCGACCCCGA CCAGGCCAAG
GTCGTCGCCC AACAGGCCGG CGTCACGGCG CCGCCGGCCC CGCGCAAGGA CCTGGAGCAG
ATCTACCTCA CCGGTCTCAC CACGCGGGCG GACGGGCCGA TCAAGCAGGA CCTCAACTCC
CACCTGCTCA ACCAGGACAC CCCGGGCGTC GCCAAGGCGG AAGAACTGCG GCTCAACATG
AGCACACCCC TCGCCACCGC ACCCGACAAG TACGGCATCC TCAAGGGCGA CGCCCAGGGC
TACCCCAACG GTCGCCGCCT CATCGACGAC GTCGTGACCG TCAACCTGCG GATGCTCCTG
GGCGAACCCG CGGGCCGGGG CGCGCCGGGC CTCATCGCCG AGGACAACCC CGCGTTCCTG
CTCAAGCCCA TCACCGGCAG CTTCCCCTAC CTGGCGCTGC CCGTCACCGC CACCGGCTGA
 
Protein sequence
MQLTSARSRW TWIAGASIAV LTATVLLGPT MRPSTATSHW DAPATTLNKQ IDATDLYAFT 
SPERQDTVTI VANYIPFQAP HKPYQFDTDA RYEVHIDNTG TGKAAVTYRW TFANKGLPVP
SFVRKREHKA GPLDSLVEQS YTLTRLRDGK SETLVRNGYA APTDMGALAT PNYPALRHKA
VVDLPGGGKV FTGTAADPFY SDNHAVNLLR FGLPFFPVKT GVPLNVSSLA LQLPKSELAL
GGDPARNPVI GVWTTASRKS SGLLGSGSAD YKQVSRLGNP NFNEVIIPLK QRDHFNTLRP
DGDESGNLVV PATLDPDQAK VVAQQAGVTA PPAPRKDLEQ IYLTGLTTRA DGPIKQDLNS
HLLNQDTPGV AKAEELRLNM STPLATAPDK YGILKGDAQG YPNGRRLIDD VVTVNLRMLL
GEPAGRGAPG LIAEDNPAFL LKPITGSFPY LALPVTATG