Gene Sros_4738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4738 
Symbol 
ID8668032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5268604 
End bp5269818 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content75% 
IMG OID 
ProductMFS transporter, DHA1 family 
Protein accessionYP_003340322 
Protein GI271966126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.746354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.505446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACTGC CCGCGTGGCT GCTCGCCCTG GTGTTCACCA CGTTCGTGTT CGCCACCGAC 
GACTACGTGA TCGCCGGCGT GCTGCCCGCG ATCTCCGCGG ACCTGGGCGT CAGCGAGGCG
GCGGGCGGGC AGCTCGTCAC CGTCTTCTCG CTGGCGTTCG CGCTGGCGGC GCCCGTGGCG
TCCGTGGTGA CCGCGACCTG GCCGCGGCGC GCTCTGCTCA CCTGGGCGTT GGCGCTGTTC
GTCGTGGCGA ATTGGGCCAG CGCGTTCACG ACCTCGTACG CGCTGCTGAT GGGGCTGCGG
GTGCTGGCCG CGTTGGCGGC GGCGGCCGTC GTTCCCGCCG CGTACGCCAT CGCGACCGCC
CTGGCCCCCG AAGGCCGGCA GGGGCGCTAC CTGGCGCTGG TGATGGGCGG GCTGACCGGG
TCGCTCGCGC TCGGCGTGCC CCTCGGCACC TGGGTGGGCG GCGCGTTCGG CTGGCAGGCG
ACGTTCGGGC TCGGCGGAGC ACTGGGGCTT GTCGCATTGG TGGCGATCCG GAGCACGCTG
CCCGAGCAGC CCCCCGCGCC CGCCATGCCG ATCCGGGATC GGCTGAGGCC GCTGGCCCGG
CCTCAGGTGC TGCTGGGGAT GCTCGGGATC GCGGCGATCG TGCTGGGCAG CATGATGGTA
CTGACCTACC TCGCACCGTT CCTGCGTGAC CTGGCCGGCG CCGGACCGAC CGAGCTGGGG
TGGGTGTTCG TGCTGGCCGG CCTCGCCGGG CTCGCGGGCG GGCAGCTCGG CGGGCGCGCT
ACCGACCGGT GGGGGGCCGA TCGGGCGCTG ATCACCGGAG TCGCGGGGTT CGCGGCGGTG
ATGGCGATCT TCAGCGCCTG TTGGTTCCTG CGGCCGGTTC CGTTGCTCGC GCTGCTGCCG
CTGCTGCTGG TGTGGGCCGC CGTTTCGTGG TGGATCCCGC CGCCCGCCCA GACCCGCCTG
CTCGCCCTGG CCGGGCCGGC GGGGCCGCAG GCGCTCGCGC TCAACAGCAG CGCCGTCTAC
GTCGGGGTGT CGGGCGGAGG CGCGCTCGGC GGGCTCGTAC TCGACGGGCA CGGAAGCGGC
TGGCTGCCCG CCGTGGCGGC CGGCGTCGAG CTGGCCGCCC TCGCCCTCTT CTGGCTGGCC
GGACGGGCCC CGCGCCCGCG ACGGTCCCGC CCTGGCTCCG ACGCGGCCAA CCTCGTCTCC
CGGAACGAGT CGTGA
 
Protein sequence
MRLPAWLLAL VFTTFVFATD DYVIAGVLPA ISADLGVSEA AGGQLVTVFS LAFALAAPVA 
SVVTATWPRR ALLTWALALF VVANWASAFT TSYALLMGLR VLAALAAAAV VPAAYAIATA
LAPEGRQGRY LALVMGGLTG SLALGVPLGT WVGGAFGWQA TFGLGGALGL VALVAIRSTL
PEQPPAPAMP IRDRLRPLAR PQVLLGMLGI AAIVLGSMMV LTYLAPFLRD LAGAGPTELG
WVFVLAGLAG LAGGQLGGRA TDRWGADRAL ITGVAGFAAV MAIFSACWFL RPVPLLALLP
LLLVWAAVSW WIPPPAQTRL LALAGPAGPQ ALALNSSAVY VGVSGGGALG GLVLDGHGSG
WLPAVAAGVE LAALALFWLA GRAPRPRRSR PGSDAANLVS RNES