Gene Sros_4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4616 
Symbol 
ID8667910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5139375 
End bp5140151 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID 
Productmetalloprotease-like protein 
Protein accessionYP_003340220 
Protein GI271966024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.839032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.161316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCC TCCTCGTCGC CCTCATGGCC GGCGCGCTGT TCAGCCTGCC CCTCACCGGG 
ACCGCCCACG CGGCCCCCGG GACCTCGGCG GTCCTCACCG GCAACCCCCT CTACAAGACC
GGCGCGATCC CCCGGCAGAC CTGTGAGGAA CCCGCCTTCA CCAGCGCCAG CCACGACGGC
GCACGCCTCT ACGTCATCGA GATGTCCGCC TGTCTCGACC GGGTGTGGTC GGCGCAGGTG
AGGAAGGCGG GCTTCACCTG GACCAAGCCC AAGGTCGTGG TGTCGCACAA GGACCGTGTC
AAGACCGCCT GCGGCCCCTA CTACCCCGGC GACACCTTCA GCCTGTACTG CATCGGCACC
GGGACCATCT ATCTCATGGT CACCGACTCG GCGCTGAGCA ATGAGCTCGA CCACCCGCGC
ATGCTGGAAA GCCTGGCGAT CGGCTACTCC TATCACGTGC AGCAGCTGGG CGGCATTCTC
AGCGAGGAGC GGCGGGCCGA GGCGAAAATG TCGAAGAAGC AGCGATGGGC GCTGAGCGCG
AAGGTCTCCC TGCAGAACCT CTGCCTCACC GGGGCCTTCC TCGGAAGTGT CTGGGACTCT
CTCTCCCACA CCAAGGCCTA CGGCACCGAT CTCATCATCG ACTGGAAGTC GGTGGAAGGC
GACCACAAGG AGCAGGGCAA GGCCAAGAAC CGGGTCTACT GGGAACAGCG CGGCTTCGAC
ACCCTGCGGC CCGGAGCGTG CAACACCTTC ACCGCACCGG CGGGAAGAGT CGCCTGA
 
Protein sequence
MRTLLVALMA GALFSLPLTG TAHAAPGTSA VLTGNPLYKT GAIPRQTCEE PAFTSASHDG 
ARLYVIEMSA CLDRVWSAQV RKAGFTWTKP KVVVSHKDRV KTACGPYYPG DTFSLYCIGT
GTIYLMVTDS ALSNELDHPR MLESLAIGYS YHVQQLGGIL SEERRAEAKM SKKQRWALSA
KVSLQNLCLT GAFLGSVWDS LSHTKAYGTD LIIDWKSVEG DHKEQGKAKN RVYWEQRGFD
TLRPGACNTF TAPAGRVA