Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4616 |
Symbol | |
ID | 8667910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5139375 |
End bp | 5140151 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | metalloprotease-like protein |
Protein accession | YP_003340220 |
Protein GI | 271966024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.839032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.161316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACCC TCCTCGTCGC CCTCATGGCC GGCGCGCTGT TCAGCCTGCC CCTCACCGGG ACCGCCCACG CGGCCCCCGG GACCTCGGCG GTCCTCACCG GCAACCCCCT CTACAAGACC GGCGCGATCC CCCGGCAGAC CTGTGAGGAA CCCGCCTTCA CCAGCGCCAG CCACGACGGC GCACGCCTCT ACGTCATCGA GATGTCCGCC TGTCTCGACC GGGTGTGGTC GGCGCAGGTG AGGAAGGCGG GCTTCACCTG GACCAAGCCC AAGGTCGTGG TGTCGCACAA GGACCGTGTC AAGACCGCCT GCGGCCCCTA CTACCCCGGC GACACCTTCA GCCTGTACTG CATCGGCACC GGGACCATCT ATCTCATGGT CACCGACTCG GCGCTGAGCA ATGAGCTCGA CCACCCGCGC ATGCTGGAAA GCCTGGCGAT CGGCTACTCC TATCACGTGC AGCAGCTGGG CGGCATTCTC AGCGAGGAGC GGCGGGCCGA GGCGAAAATG TCGAAGAAGC AGCGATGGGC GCTGAGCGCG AAGGTCTCCC TGCAGAACCT CTGCCTCACC GGGGCCTTCC TCGGAAGTGT CTGGGACTCT CTCTCCCACA CCAAGGCCTA CGGCACCGAT CTCATCATCG ACTGGAAGTC GGTGGAAGGC GACCACAAGG AGCAGGGCAA GGCCAAGAAC CGGGTCTACT GGGAACAGCG CGGCTTCGAC ACCCTGCGGC CCGGAGCGTG CAACACCTTC ACCGCACCGG CGGGAAGAGT CGCCTGA
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Protein sequence | MRTLLVALMA GALFSLPLTG TAHAAPGTSA VLTGNPLYKT GAIPRQTCEE PAFTSASHDG ARLYVIEMSA CLDRVWSAQV RKAGFTWTKP KVVVSHKDRV KTACGPYYPG DTFSLYCIGT GTIYLMVTDS ALSNELDHPR MLESLAIGYS YHVQQLGGIL SEERRAEAKM SKKQRWALSA KVSLQNLCLT GAFLGSVWDS LSHTKAYGTD LIIDWKSVEG DHKEQGKAKN RVYWEQRGFD TLRPGACNTF TAPAGRVA
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